Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx3-2P97503 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx3-2P97503 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx3-2P97503 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx3-2P97503 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx3-2P97503 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx3-2P97503 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx3-2P97503 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx3-2P97503 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.2■□□□□ 0.18
Nkx3-2P97503 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.2■□□□□ 0.18
Nkx3-2P97503 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx3-2P97503 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Nkx3-2P97503 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nkx3-2P97503 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx3-2P97503 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx3-2P97503 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Nkx3-2P97503 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.19■□□□□ 0.18
Nkx3-2P97503 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx3-2P97503 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Gm2274-201ENSMUST00000184539 609 ntBASIC16.19■□□□□ 0.18
Nkx3-2P97503 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx3-2P97503 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.18■□□□□ 0.18
Nkx3-2P97503 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx3-2P97503 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx3-2P97503 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx3-2P97503 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Nkx3-2P97503 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nkx3-2P97503 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx3-2P97503 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx3-2P97503 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx3-2P97503 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx3-2P97503 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx3-2P97503 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx3-2P97503 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx3-2P97503 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx3-2P97503 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx3-2P97503 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nkx3-2P97503 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Nkx3-2P97503 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx3-2P97503 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx3-2P97503 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx3-2P97503 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx3-2P97503 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx3-2P97503 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx3-2P97503 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx3-2P97503 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx3-2P97503 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.16■□□□□ 0.18
Nkx3-2P97503 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx3-2P97503 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx3-2P97503 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.16■□□□□ 0.18
Nkx3-2P97503 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx3-2P97503 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.16■□□□□ 0.18
Nkx3-2P97503 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx3-2P97503 Gm18032-201ENSMUST00000222541 538 ntBASIC16.16■□□□□ 0.18
Nkx3-2P97503 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx3-2P97503 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nkx3-2P97503 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Nkx3-2P97503 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Nkx3-2P97503 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.16■□□□□ 0.18
Nkx3-2P97503 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.16■□□□□ 0.18
Nkx3-2P97503 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx3-2P97503 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx3-2P97503 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms