Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43cP86449 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43cP86449 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43cP86449 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Trim43cP86449 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43cP86449 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43cP86449 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43cP86449 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.65■□□□□ 0.58
Trim43cP86449 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43cP86449 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim43cP86449 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43cP86449 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43cP86449 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43cP86449 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43cP86449 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trim43cP86449 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43cP86449 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Trim43cP86449 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43cP86449 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43cP86449 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43cP86449 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43cP86449 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim43cP86449 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim43cP86449 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trim43cP86449 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim43cP86449 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43cP86449 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43cP86449 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43cP86449 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43cP86449 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim43cP86449 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.64■□□□□ 0.57
Trim43cP86449 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.64■□□□□ 0.57
Trim43cP86449 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43cP86449 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Trim43cP86449 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43cP86449 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43cP86449 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43cP86449 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.64■□□□□ 0.57
Trim43cP86449 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43cP86449 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43cP86449 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43cP86449 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.64■□□□□ 0.57
Trim43cP86449 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43cP86449 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43cP86449 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43cP86449 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43cP86449 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim43cP86449 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43cP86449 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43cP86449 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43cP86449 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.63■□□□□ 0.57
Trim43cP86449 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43cP86449 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43cP86449 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43cP86449 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43cP86449 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trim43cP86449 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43cP86449 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim43cP86449 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43cP86449 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43cP86449 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43cP86449 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trim43cP86449 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43cP86449 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.62■□□□□ 0.57
Trim43cP86449 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.62■□□□□ 0.57
Trim43cP86449 Gm37055-201ENSMUST00000191866 133 ntBASIC18.62■□□□□ 0.57
Trim43cP86449 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43cP86449 Gm10252-201ENSMUST00000209541 832 ntBASIC18.62■□□□□ 0.57
Trim43cP86449 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.62■□□□□ 0.57
Trim43cP86449 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43cP86449 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43cP86449 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43cP86449 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43cP86449 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43cP86449 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.62■□□□□ 0.57
Trim43cP86449 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trim43cP86449 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43cP86449 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43cP86449 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43cP86449 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43cP86449 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43cP86449 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43cP86449 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43cP86449 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43cP86449 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43cP86449 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Trim43cP86449 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43cP86449 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43cP86449 Gm27000-201ENSMUST00000182943 842 ntBASIC18.61■□□□□ 0.57
Trim43cP86449 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim43cP86449 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Trim43cP86449 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.61■□□□□ 0.57
Trim43cP86449 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.61■□□□□ 0.57
Trim43cP86449 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43cP86449 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trim43cP86449 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43cP86449 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43cP86449 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43cP86449 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43cP86449 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms