Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.65■□□□□ 0.42
Trim43bP86448 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43bP86448 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43bP86448 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim43bP86448 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Trim43bP86448 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim43bP86448 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim43bP86448 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trim43bP86448 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43bP86448 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43bP86448 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43bP86448 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43bP86448 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43bP86448 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43bP86448 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43bP86448 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.64■□□□□ 0.41
Trim43bP86448 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim43bP86448 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim43bP86448 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim43bP86448 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim43bP86448 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim43bP86448 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trim43bP86448 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim43bP86448 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim43bP86448 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim43bP86448 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43bP86448 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43bP86448 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43bP86448 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim43bP86448 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43bP86448 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43bP86448 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Trim43bP86448 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trim43bP86448 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43bP86448 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43bP86448 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trim43bP86448 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43bP86448 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43bP86448 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43bP86448 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43bP86448 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43bP86448 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43bP86448 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43bP86448 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43bP86448 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43bP86448 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Trim43bP86448 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Trim43bP86448 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43bP86448 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Trim43bP86448 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43bP86448 Gm13216-201ENSMUST00000117145 591 ntBASIC17.61■□□□□ 0.41
Trim43bP86448 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.61■□□□□ 0.41
Trim43bP86448 Gm15378-201ENSMUST00000121894 207 ntBASIC17.61■□□□□ 0.41
Trim43bP86448 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trim43bP86448 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43bP86448 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43bP86448 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43bP86448 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43bP86448 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.61■□□□□ 0.41
Trim43bP86448 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.61■□□□□ 0.41
Trim43bP86448 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43bP86448 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43bP86448 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43bP86448 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43bP86448 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43bP86448 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trim43bP86448 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trim43bP86448 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43bP86448 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43bP86448 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43bP86448 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.6■□□□□ 0.41
Trim43bP86448 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.6■□□□□ 0.41
Trim43bP86448 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43bP86448 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43bP86448 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43bP86448 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43bP86448 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trim43bP86448 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43bP86448 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43bP86448 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43bP86448 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43bP86448 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms