Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CiitaP79621 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CiitaP79621 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.6■□□□□ 0.57
CiitaP79621 Gm27000-201ENSMUST00000182943 842 ntBASIC18.6■□□□□ 0.57
CiitaP79621 Gm27389-201ENSMUST00000183622 195 ntBASIC18.6■□□□□ 0.57
CiitaP79621 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CiitaP79621 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CiitaP79621 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CiitaP79621 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CiitaP79621 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CiitaP79621 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CiitaP79621 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CiitaP79621 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CiitaP79621 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CiitaP79621 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.6■□□□□ 0.57
CiitaP79621 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CiitaP79621 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CiitaP79621 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CiitaP79621 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CiitaP79621 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CiitaP79621 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CiitaP79621 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.6■□□□□ 0.57
CiitaP79621 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CiitaP79621 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CiitaP79621 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CiitaP79621 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.59■□□□□ 0.57
CiitaP79621 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CiitaP79621 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CiitaP79621 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CiitaP79621 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CiitaP79621 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CiitaP79621 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CiitaP79621 AA414768-201ENSMUST00000121924 1257 ntBASIC18.59■□□□□ 0.57
CiitaP79621 Gm6345-202ENSMUST00000180900 204 ntBASIC18.59■□□□□ 0.57
CiitaP79621 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CiitaP79621 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CiitaP79621 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CiitaP79621 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CiitaP79621 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CiitaP79621 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CiitaP79621 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CiitaP79621 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CiitaP79621 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CiitaP79621 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CiitaP79621 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CiitaP79621 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CiitaP79621 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CiitaP79621 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CiitaP79621 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
CiitaP79621 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CiitaP79621 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CiitaP79621 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CiitaP79621 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CiitaP79621 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CiitaP79621 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CiitaP79621 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CiitaP79621 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.58■□□□□ 0.56
CiitaP79621 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CiitaP79621 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CiitaP79621 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CiitaP79621 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CiitaP79621 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CiitaP79621 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CiitaP79621 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CiitaP79621 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CiitaP79621 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.57■□□□□ 0.56
CiitaP79621 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CiitaP79621 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CiitaP79621 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CiitaP79621 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CiitaP79621 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
CiitaP79621 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CiitaP79621 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CiitaP79621 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.57■□□□□ 0.56
CiitaP79621 Gm18958-201ENSMUST00000174258 762 ntBASIC18.57■□□□□ 0.56
CiitaP79621 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.57■□□□□ 0.56
CiitaP79621 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CiitaP79621 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CiitaP79621 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CiitaP79621 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.57■□□□□ 0.56
CiitaP79621 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CiitaP79621 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CiitaP79621 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CiitaP79621 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CiitaP79621 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CiitaP79621 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CiitaP79621 Gm26039-201ENSMUST00000158152 144 ntBASIC18.56■□□□□ 0.56
CiitaP79621 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CiitaP79621 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CiitaP79621 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CiitaP79621 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CiitaP79621 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CiitaP79621 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CiitaP79621 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CiitaP79621 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CiitaP79621 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CiitaP79621 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CiitaP79621 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CiitaP79621 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.56■□□□□ 0.56
CiitaP79621 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms