Protein–RNA interactions for Protein: P70663

Sparcl1, SPARC-like protein 1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sparcl1P70663 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sparcl1P70663 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.82■□□□□ 0.6
Sparcl1P70663 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sparcl1P70663 Gm29791-202ENSMUST00000207888 369 ntBASIC18.82■□□□□ 0.6
Sparcl1P70663 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sparcl1P70663 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sparcl1P70663 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sparcl1P70663 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sparcl1P70663 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sparcl1P70663 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Sparcl1P70663 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.82■□□□□ 0.6
Sparcl1P70663 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sparcl1P70663 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sparcl1P70663 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sparcl1P70663 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sparcl1P70663 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sparcl1P70663 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sparcl1P70663 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.81■□□□□ 0.6
Sparcl1P70663 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sparcl1P70663 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Sparcl1P70663 Gm10418-201ENSMUST00000100943 576 ntBASIC18.81■□□□□ 0.6
Sparcl1P70663 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.81■□□□□ 0.6
Sparcl1P70663 Gm33142-201ENSMUST00000193913 867 ntBASIC18.81■□□□□ 0.6
Sparcl1P70663 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sparcl1P70663 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sparcl1P70663 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sparcl1P70663 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sparcl1P70663 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sparcl1P70663 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sparcl1P70663 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sparcl1P70663 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sparcl1P70663 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.8■□□□□ 0.6
Sparcl1P70663 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.8■□□□□ 0.6
Sparcl1P70663 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sparcl1P70663 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sparcl1P70663 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sparcl1P70663 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sparcl1P70663 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sparcl1P70663 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sparcl1P70663 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sparcl1P70663 Gm16061-201ENSMUST00000122167 857 ntBASIC18.78■□□□□ 0.6
Sparcl1P70663 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sparcl1P70663 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.78■□□□□ 0.6
Sparcl1P70663 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sparcl1P70663 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sparcl1P70663 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sparcl1P70663 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sparcl1P70663 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.78■□□□□ 0.6
Sparcl1P70663 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sparcl1P70663 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sparcl1P70663 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sparcl1P70663 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.77■□□□□ 0.6
Sparcl1P70663 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sparcl1P70663 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sparcl1P70663 Gm7370-201ENSMUST00000219471 767 ntBASIC18.77■□□□□ 0.6
Sparcl1P70663 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sparcl1P70663 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sparcl1P70663 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sparcl1P70663 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sparcl1P70663 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sparcl1P70663 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Sparcl1P70663 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sparcl1P70663 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms