Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Six5P70178 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.06■□□□□ 0.16
Six5P70178 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Six5P70178 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Six5P70178 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Six5P70178 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Six5P70178 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Six5P70178 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Six5P70178 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Six5P70178 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Six5P70178 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.05■□□□□ 0.16
Six5P70178 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Six5P70178 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Six5P70178 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Six5P70178 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Six5P70178 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Six5P70178 Gm12085-201ENSMUST00000119263 940 ntBASIC16.05■□□□□ 0.16
Six5P70178 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.05■□□□□ 0.16
Six5P70178 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.05■□□□□ 0.16
Six5P70178 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.05■□□□□ 0.16
Six5P70178 Gm9731-201ENSMUST00000209480 747 ntBASIC16.05■□□□□ 0.16
Six5P70178 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.05■□□□□ 0.16
Six5P70178 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Six5P70178 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Six5P70178 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.05■□□□□ 0.16
Six5P70178 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Six5P70178 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six5P70178 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six5P70178 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Six5P70178 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six5P70178 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Six5P70178 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six5P70178 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six5P70178 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six5P70178 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six5P70178 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Six5P70178 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six5P70178 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.04■□□□□ 0.16
Six5P70178 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.04■□□□□ 0.16
Six5P70178 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six5P70178 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.04■□□□□ 0.16
Six5P70178 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six5P70178 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Six5P70178 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Six5P70178 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six5P70178 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six5P70178 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Six5P70178 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six5P70178 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Six5P70178 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six5P70178 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six5P70178 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six5P70178 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six5P70178 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six5P70178 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six5P70178 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.03■□□□□ 0.16
Six5P70178 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.03■□□□□ 0.16
Six5P70178 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.03■□□□□ 0.16
Six5P70178 Il3ra-202ENSMUST00000223589 738 ntBASIC16.03■□□□□ 0.16
Six5P70178 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six5P70178 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six5P70178 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six5P70178 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Six5P70178 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Six5P70178 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six5P70178 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six5P70178 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six5P70178 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Six5P70178 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six5P70178 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six5P70178 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six5P70178 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six5P70178 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.02■□□□□ 0.16
Six5P70178 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Six5P70178 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.02■□□□□ 0.16
Six5P70178 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Six5P70178 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six5P70178 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six5P70178 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six5P70178 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Six5P70178 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.02■□□□□ 0.16
Six5P70178 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Six5P70178 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Six5P70178 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Six5P70178 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Six5P70178 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Six5P70178 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Six5P70178 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Six5P70178 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Six5P70178 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Six5P70178 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six5P70178 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Six5P70178 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six5P70178 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Six5P70178 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six5P70178 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.01■□□□□ 0.15
Six5P70178 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Six5P70178 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six5P70178 Gm7638-201ENSMUST00000121348 967 ntBASIC16.01■□□□□ 0.15
Six5P70178 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms