Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ybx1P62960 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ybx1P62960 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ybx1P62960 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ybx1P62960 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ybx1P62960 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ybx1P62960 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ybx1P62960 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ybx1P62960 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ybx1P62960 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.57■□□□□ 0.4
Ybx1P62960 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ybx1P62960 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ybx1P62960 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ybx1P62960 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ybx1P62960 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ybx1P62960 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ybx1P62960 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ybx1P62960 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ybx1P62960 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ybx1P62960 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ybx1P62960 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ybx1P62960 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ybx1P62960 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Ybx1P62960 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Ybx1P62960 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ybx1P62960 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ybx1P62960 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ybx1P62960 Gm7153-201ENSMUST00000117092 455 ntBASIC17.56■□□□□ 0.4
Ybx1P62960 Mir8112-201ENSMUST00000184382 131 ntBASIC17.56■□□□□ 0.4
Ybx1P62960 Gm27742-201ENSMUST00000184667 60 ntBASIC17.56■□□□□ 0.4
Ybx1P62960 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ybx1P62960 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ybx1P62960 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ybx1P62960 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ybx1P62960 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ybx1P62960 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ybx1P62960 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ybx1P62960 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.56■□□□□ 0.4
Ybx1P62960 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ybx1P62960 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ybx1P62960 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.55■□□□□ 0.4
Ybx1P62960 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Ybx1P62960 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ybx1P62960 Gm27357-201ENSMUST00000183754 135 ntBASIC17.55■□□□□ 0.4
Ybx1P62960 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ybx1P62960 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.55■□□□□ 0.4
Ybx1P62960 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ybx1P62960 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ybx1P62960 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ybx1P62960 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ybx1P62960 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ybx1P62960 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ybx1P62960 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ybx1P62960 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ybx1P62960 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ybx1P62960 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ybx1P62960 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ybx1P62960 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ybx1P62960 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ybx1P62960 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ybx1P62960 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ybx1P62960 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ybx1P62960 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ybx1P62960 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ybx1P62960 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ybx1P62960 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.54■□□□□ 0.4
Ybx1P62960 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ybx1P62960 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ybx1P62960 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ybx1P62960 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Ybx1P62960 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.54■□□□□ 0.4
Ybx1P62960 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.54■□□□□ 0.4
Ybx1P62960 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ybx1P62960 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ybx1P62960 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ybx1P62960 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ybx1P62960 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ybx1P62960 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.53■□□□□ 0.4
Ybx1P62960 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ybx1P62960 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ybx1P62960 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ybx1P62960 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ybx1P62960 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ybx1P62960 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ybx1P62960 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ybx1P62960 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ybx1P62960 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ybx1P62960 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ybx1P62960 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ybx1P62960 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ybx1P62960 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ybx1P62960 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ybx1P62960 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ybx1P62960 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Ybx1P62960 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.53■□□□□ 0.4
Ybx1P62960 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.52■□□□□ 0.4
Ybx1P62960 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ybx1P62960 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ybx1P62960 Olfr129-201ENSMUST00000122318 993 ntBASIC17.52■□□□□ 0.4
Ybx1P62960 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms