Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC21.71■■□□□ 1.07
Vps33bP59016 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC21.71■■□□□ 1.07
Vps33bP59016 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC21.71■■□□□ 1.07
Vps33bP59016 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps33bP59016 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vps33bP59016 Psmb5-202ENSMUST00000227257 622 ntBASIC21.71■■□□□ 1.07
Vps33bP59016 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps33bP59016 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps33bP59016 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps33bP59016 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps33bP59016 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps33bP59016 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vps33bP59016 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps33bP59016 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Vps33bP59016 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps33bP59016 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vps33bP59016 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.7■■□□□ 1.07
Vps33bP59016 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Vps33bP59016 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.7■■□□□ 1.06
Vps33bP59016 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Vps33bP59016 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps33bP59016 Gm15467-201ENSMUST00000120582 445 ntBASIC21.7■■□□□ 1.06
Vps33bP59016 Gm6736-201ENSMUST00000166583 948 ntBASIC21.7■■□□□ 1.06
Vps33bP59016 Gm2756-201ENSMUST00000195851 400 ntBASIC21.7■■□□□ 1.06
Vps33bP59016 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Vps33bP59016 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Vps33bP59016 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps33bP59016 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Vps33bP59016 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps33bP59016 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps33bP59016 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps33bP59016 AC154527.4-201ENSMUST00000224364 1667 ntBASIC21.69■■□□□ 1.06
Vps33bP59016 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps33bP59016 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps33bP59016 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Vps33bP59016 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps33bP59016 Gm27702-201ENSMUST00000184512 56 ntBASIC21.69■■□□□ 1.06
Vps33bP59016 Rbfox2-207ENSMUST00000227533 1041 ntBASIC21.69■■□□□ 1.06
Vps33bP59016 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Vps33bP59016 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps33bP59016 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps33bP59016 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Vps33bP59016 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps33bP59016 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vps33bP59016 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vps33bP59016 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
Vps33bP59016 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps33bP59016 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vps33bP59016 Gm44430-201ENSMUST00000203376 995 ntBASIC21.68■■□□□ 1.06
Vps33bP59016 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vps33bP59016 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
Vps33bP59016 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps33bP59016 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Vps33bP59016 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Vps33bP59016 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vps33bP59016 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps33bP59016 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps33bP59016 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps33bP59016 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps33bP59016 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Vps33bP59016 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Vps33bP59016 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC21.67■■□□□ 1.06
Vps33bP59016 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC21.67■■□□□ 1.06
Vps33bP59016 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC21.67■■□□□ 1.06
Vps33bP59016 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps33bP59016 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps33bP59016 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps33bP59016 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
Vps33bP59016 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps33bP59016 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps33bP59016 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps33bP59016 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps33bP59016 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Vps33bP59016 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps33bP59016 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.66■■□□□ 1.06
Vps33bP59016 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps33bP59016 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps33bP59016 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC21.66■■□□□ 1.06
Vps33bP59016 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Vps33bP59016 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Vps33bP59016 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps33bP59016 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Vps33bP59016 CT943659.1-201ENSMUST00000215459 326 ntBASIC21.66■■□□□ 1.06
Vps33bP59016 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps33bP59016 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps33bP59016 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps33bP59016 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vps33bP59016 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Vps33bP59016 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps33bP59016 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps33bP59016 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Vps33bP59016 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Vps33bP59016 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Vps33bP59016 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Vps33bP59016 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Vps33bP59016 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vps33bP59016 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC21.65■■□□□ 1.06
Vps33bP59016 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC21.65■■□□□ 1.06
Vps33bP59016 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC21.65■■□□□ 1.06
Vps33bP59016 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms