Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.84■□□□□ 0.29
CtskP55097 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CtskP55097 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CtskP55097 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CtskP55097 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CtskP55097 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CtskP55097 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CtskP55097 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CtskP55097 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
CtskP55097 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CtskP55097 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtskP55097 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtskP55097 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtskP55097 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CtskP55097 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.83■□□□□ 0.28
CtskP55097 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.83■□□□□ 0.28
CtskP55097 Gm6345-202ENSMUST00000180900 204 ntBASIC16.83■□□□□ 0.28
CtskP55097 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtskP55097 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtskP55097 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CtskP55097 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtskP55097 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtskP55097 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtskP55097 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtskP55097 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.83■□□□□ 0.28
CtskP55097 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CtskP55097 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.82■□□□□ 0.28
CtskP55097 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CtskP55097 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.82■□□□□ 0.28
CtskP55097 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CtskP55097 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CtskP55097 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.82■□□□□ 0.28
CtskP55097 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.82■□□□□ 0.28
CtskP55097 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.82■□□□□ 0.28
CtskP55097 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CtskP55097 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.82■□□□□ 0.28
CtskP55097 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtskP55097 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtskP55097 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtskP55097 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtskP55097 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CtskP55097 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CtskP55097 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CtskP55097 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtskP55097 Gm13401-201ENSMUST00000117074 291 ntBASIC16.81■□□□□ 0.28
CtskP55097 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.81■□□□□ 0.28
CtskP55097 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.81■□□□□ 0.28
CtskP55097 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.81■□□□□ 0.28
CtskP55097 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.81■□□□□ 0.28
CtskP55097 Gm18101-201ENSMUST00000215769 548 ntBASIC16.81■□□□□ 0.28
CtskP55097 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtskP55097 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CtskP55097 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtskP55097 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtskP55097 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtskP55097 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.81■□□□□ 0.28
CtskP55097 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtskP55097 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtskP55097 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtskP55097 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CtskP55097 Tgds-204ENSMUST00000228543 1594 ntBASIC16.81■□□□□ 0.28
CtskP55097 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CtskP55097 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CtskP55097 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CtskP55097 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CtskP55097 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CtskP55097 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CtskP55097 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CtskP55097 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.8■□□□□ 0.28
CtskP55097 Gm24841-201ENSMUST00000158676 357 ntBASIC16.8■□□□□ 0.28
CtskP55097 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CtskP55097 Gm22697-201ENSMUST00000175194 63 ntBASIC16.8■□□□□ 0.28
CtskP55097 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CtskP55097 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CtskP55097 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CtskP55097 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.8■□□□□ 0.28
CtskP55097 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CtskP55097 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.8■□□□□ 0.28
CtskP55097 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CtskP55097 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CtskP55097 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms