Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Ddx6P54823 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ddx6P54823 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx6P54823 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Ddx6P54823 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx6P54823 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx6P54823 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx6P54823 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx6P54823 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx6P54823 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.45■□□□□ 0.38
Ddx6P54823 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ddx6P54823 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx6P54823 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx6P54823 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.45■□□□□ 0.38
Ddx6P54823 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx6P54823 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx6P54823 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx6P54823 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.44■□□□□ 0.38
Ddx6P54823 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx6P54823 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.44■□□□□ 0.38
Ddx6P54823 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx6P54823 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx6P54823 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx6P54823 Gm27357-201ENSMUST00000183754 135 ntBASIC17.44■□□□□ 0.38
Ddx6P54823 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.44■□□□□ 0.38
Ddx6P54823 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.44■□□□□ 0.38
Ddx6P54823 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx6P54823 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ddx6P54823 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx6P54823 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx6P54823 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx6P54823 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Ddx6P54823 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx6P54823 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx6P54823 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ddx6P54823 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx6P54823 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx6P54823 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx6P54823 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx6P54823 Gm27742-201ENSMUST00000184667 60 ntBASIC17.43■□□□□ 0.38
Ddx6P54823 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx6P54823 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx6P54823 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ddx6P54823 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx6P54823 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ddx6P54823 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx6P54823 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.43■□□□□ 0.38
Ddx6P54823 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ddx6P54823 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ddx6P54823 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx6P54823 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.43■□□□□ 0.38
Ddx6P54823 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx6P54823 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx6P54823 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx6P54823 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx6P54823 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx6P54823 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx6P54823 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx6P54823 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ddx6P54823 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.42■□□□□ 0.38
Ddx6P54823 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx6P54823 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx6P54823 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx6P54823 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.42■□□□□ 0.38
Ddx6P54823 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx6P54823 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx6P54823 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx6P54823 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx6P54823 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx6P54823 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx6P54823 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx6P54823 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx6P54823 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx6P54823 Gm28033-201ENSMUST00000184224 96 ntBASIC17.41■□□□□ 0.38
Ddx6P54823 Gm17971-201ENSMUST00000190239 806 ntBASIC17.41■□□□□ 0.38
Ddx6P54823 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.41■□□□□ 0.38
Ddx6P54823 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx6P54823 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx6P54823 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx6P54823 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx6P54823 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx6P54823 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx6P54823 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx6P54823 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx6P54823 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx6P54823 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx6P54823 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx6P54823 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx6P54823 Mir3081-201ENSMUST00000175305 84 ntBASIC17.4■□□□□ 0.38
Ddx6P54823 Gm8969-201ENSMUST00000199694 526 ntBASIC17.4■□□□□ 0.38
Ddx6P54823 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx6P54823 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.4■□□□□ 0.38
Ddx6P54823 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ddx6P54823 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ddx6P54823 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx6P54823 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ddx6P54823 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ddx6P54823 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Ddx6P54823 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ddx6P54823 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms