Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.43■□□□□ 0.38
Vps4bP46467 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4bP46467 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4bP46467 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4bP46467 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.43■□□□□ 0.38
Vps4bP46467 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Vps4bP46467 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4bP46467 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Vps4bP46467 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4bP46467 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Vps4bP46467 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Vps4bP46467 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4bP46467 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Vps4bP46467 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4bP46467 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Vps4bP46467 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Vps4bP46467 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4bP46467 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.42■□□□□ 0.38
Vps4bP46467 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4bP46467 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4bP46467 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Vps4bP46467 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Vps4bP46467 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4bP46467 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.42■□□□□ 0.38
Vps4bP46467 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Vps4bP46467 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.42■□□□□ 0.38
Vps4bP46467 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Vps4bP46467 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4bP46467 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4bP46467 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Vps4bP46467 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4bP46467 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4bP46467 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Vps4bP46467 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4bP46467 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.41■□□□□ 0.38
Vps4bP46467 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4bP46467 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4bP46467 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Vps4bP46467 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.41■□□□□ 0.38
Vps4bP46467 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.41■□□□□ 0.38
Vps4bP46467 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4bP46467 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4bP46467 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Vps4bP46467 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4bP46467 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Vps4bP46467 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4bP46467 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4bP46467 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4bP46467 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4bP46467 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4bP46467 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4bP46467 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Vps4bP46467 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.41■□□□□ 0.38
Vps4bP46467 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps4bP46467 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps4bP46467 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps4bP46467 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.4■□□□□ 0.38
Vps4bP46467 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Vps4bP46467 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps4bP46467 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.4■□□□□ 0.38
Vps4bP46467 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Vps4bP46467 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Vps4bP46467 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.4■□□□□ 0.38
Vps4bP46467 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps4bP46467 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.4■□□□□ 0.38
Vps4bP46467 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.4■□□□□ 0.38
Vps4bP46467 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.4■□□□□ 0.38
Vps4bP46467 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps4bP46467 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps4bP46467 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps4bP46467 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Vps4bP46467 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps4bP46467 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps4bP46467 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps4bP46467 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Vps4bP46467 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.39■□□□□ 0.38
Vps4bP46467 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Vps4bP46467 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps4bP46467 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vps4bP46467 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.39■□□□□ 0.37
Vps4bP46467 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps4bP46467 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vps4bP46467 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps4bP46467 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vps4bP46467 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.39■□□□□ 0.37
Vps4bP46467 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Vps4bP46467 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.39■□□□□ 0.37
Vps4bP46467 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps4bP46467 Gm18025-201ENSMUST00000221733 862 ntBASIC17.39■□□□□ 0.37
Vps4bP46467 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps4bP46467 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps4bP46467 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps4bP46467 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps4bP46467 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.39■□□□□ 0.37
Vps4bP46467 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Vps4bP46467 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps4bP46467 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.38■□□□□ 0.37
Vps4bP46467 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps4bP46467 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps4bP46467 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms