Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.89■□□□□ 0.29
Cd9P40240 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd9P40240 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.89■□□□□ 0.29
Cd9P40240 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd9P40240 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd9P40240 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd9P40240 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cd9P40240 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cd9P40240 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.89■□□□□ 0.29
Cd9P40240 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cd9P40240 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.89■□□□□ 0.29
Cd9P40240 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.89■□□□□ 0.29
Cd9P40240 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cd9P40240 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd9P40240 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cd9P40240 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cd9P40240 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd9P40240 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd9P40240 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd9P40240 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd9P40240 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd9P40240 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd9P40240 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.89■□□□□ 0.29
Cd9P40240 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd9P40240 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd9P40240 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.88■□□□□ 0.29
Cd9P40240 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.88■□□□□ 0.29
Cd9P40240 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Cd9P40240 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.88■□□□□ 0.29
Cd9P40240 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cd9P40240 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cd9P40240 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
Cd9P40240 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.88■□□□□ 0.29
Cd9P40240 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd9P40240 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.87■□□□□ 0.29
Cd9P40240 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.87■□□□□ 0.29
Cd9P40240 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.87■□□□□ 0.29
Cd9P40240 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.87■□□□□ 0.29
Cd9P40240 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd9P40240 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd9P40240 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd9P40240 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Cd9P40240 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd9P40240 Haglr-201ENSMUST00000100000 2085 ntBASIC16.87■□□□□ 0.29
Cd9P40240 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cd9P40240 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.87■□□□□ 0.29
Cd9P40240 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cd9P40240 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.86■□□□□ 0.29
Cd9P40240 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.86■□□□□ 0.29
Cd9P40240 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
Cd9P40240 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd9P40240 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd9P40240 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd9P40240 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd9P40240 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cd9P40240 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd9P40240 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cd9P40240 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd9P40240 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cd9P40240 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd9P40240 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cd9P40240 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cd9P40240 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd9P40240 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd9P40240 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cd9P40240 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd9P40240 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd9P40240 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd9P40240 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.85■□□□□ 0.29
Cd9P40240 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cd9P40240 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cd9P40240 Gm27463-201ENSMUST00000183569 57 ntBASIC16.85■□□□□ 0.29
Cd9P40240 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.85■□□□□ 0.29
Cd9P40240 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd9P40240 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd9P40240 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd9P40240 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.85■□□□□ 0.29
Cd9P40240 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd9P40240 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd9P40240 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd9P40240 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms