Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.05□□□□□ -0.16
Timp3P39876 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.05□□□□□ -0.16
Timp3P39876 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Timp3P39876 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.05□□□□□ -0.16
Timp3P39876 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.05□□□□□ -0.16
Timp3P39876 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Timp3P39876 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Timp3P39876 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Timp3P39876 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Timp3P39876 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.04□□□□□ -0.16
Timp3P39876 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Timp3P39876 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Timp3P39876 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Timp3P39876 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Timp3P39876 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.04□□□□□ -0.16
Timp3P39876 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.04□□□□□ -0.16
Timp3P39876 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.04□□□□□ -0.16
Timp3P39876 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Timp3P39876 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.04□□□□□ -0.16
Timp3P39876 Gm4974-201ENSMUST00000209974 875 ntBASIC14.04□□□□□ -0.16
Timp3P39876 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.04□□□□□ -0.16
Timp3P39876 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Timp3P39876 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Timp3P39876 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Timp3P39876 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Timp3P39876 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Timp3P39876 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.03□□□□□ -0.16
Timp3P39876 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Timp3P39876 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Timp3P39876 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.03□□□□□ -0.16
Timp3P39876 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.03□□□□□ -0.16
Timp3P39876 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.03□□□□□ -0.16
Timp3P39876 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.03□□□□□ -0.16
Timp3P39876 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.03□□□□□ -0.16
Timp3P39876 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Timp3P39876 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Timp3P39876 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Timp3P39876 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Timp3P39876 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Timp3P39876 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Timp3P39876 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Timp3P39876 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Timp3P39876 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Timp3P39876 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Timp3P39876 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Timp3P39876 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Timp3P39876 Gm8969-201ENSMUST00000199694 526 ntBASIC14.02□□□□□ -0.17
Timp3P39876 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Timp3P39876 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Timp3P39876 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Timp3P39876 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Timp3P39876 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Timp3P39876 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.02□□□□□ -0.17
Timp3P39876 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Timp3P39876 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Timp3P39876 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Timp3P39876 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Timp3P39876 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Timp3P39876 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Timp3P39876 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Timp3P39876 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Timp3P39876 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms