Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Fen1P39749 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.29■□□□□ 0.36
Fen1P39749 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fen1P39749 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fen1P39749 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fen1P39749 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fen1P39749 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Fen1P39749 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fen1P39749 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Fen1P39749 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fen1P39749 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.29■□□□□ 0.36
Fen1P39749 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fen1P39749 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fen1P39749 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Fen1P39749 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fen1P39749 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Fen1P39749 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Fen1P39749 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.29■□□□□ 0.36
Fen1P39749 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fen1P39749 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Fen1P39749 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Fen1P39749 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.28■□□□□ 0.36
Fen1P39749 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.28■□□□□ 0.36
Fen1P39749 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fen1P39749 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Fen1P39749 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Fen1P39749 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fen1P39749 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Fen1P39749 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fen1P39749 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fen1P39749 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fen1P39749 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Fen1P39749 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fen1P39749 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Fen1P39749 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fen1P39749 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fen1P39749 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.27■□□□□ 0.36
Fen1P39749 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.27■□□□□ 0.36
Fen1P39749 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fen1P39749 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Fen1P39749 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Fen1P39749 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Fen1P39749 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fen1P39749 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fen1P39749 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Fen1P39749 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fen1P39749 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.26■□□□□ 0.35
Fen1P39749 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.26■□□□□ 0.35
Fen1P39749 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Fen1P39749 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Fen1P39749 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fen1P39749 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fen1P39749 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Fen1P39749 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Fen1P39749 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fen1P39749 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fen1P39749 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Fen1P39749 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fen1P39749 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fen1P39749 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Fen1P39749 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fen1P39749 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Fen1P39749 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fen1P39749 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fen1P39749 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fen1P39749 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fen1P39749 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Fen1P39749 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Fen1P39749 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Fen1P39749 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fen1P39749 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.25■□□□□ 0.35
Fen1P39749 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Fen1P39749 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fen1P39749 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Fen1P39749 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.25■□□□□ 0.35
Fen1P39749 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fen1P39749 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fen1P39749 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fen1P39749 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Fen1P39749 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fen1P39749 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fen1P39749 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms