Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HmgclP38060 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HmgclP38060 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HmgclP38060 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HmgclP38060 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HmgclP38060 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HmgclP38060 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HmgclP38060 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HmgclP38060 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HmgclP38060 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HmgclP38060 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HmgclP38060 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HmgclP38060 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HmgclP38060 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HmgclP38060 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HmgclP38060 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HmgclP38060 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
HmgclP38060 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
HmgclP38060 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HmgclP38060 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HmgclP38060 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HmgclP38060 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HmgclP38060 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HmgclP38060 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HmgclP38060 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HmgclP38060 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HmgclP38060 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HmgclP38060 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HmgclP38060 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HmgclP38060 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HmgclP38060 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HmgclP38060 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HmgclP38060 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HmgclP38060 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HmgclP38060 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HmgclP38060 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HmgclP38060 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HmgclP38060 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HmgclP38060 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.88■□□□□ 0.29
HmgclP38060 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HmgclP38060 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HmgclP38060 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.88■□□□□ 0.29
HmgclP38060 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HmgclP38060 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HmgclP38060 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HmgclP38060 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.88■□□□□ 0.29
HmgclP38060 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HmgclP38060 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.88■□□□□ 0.29
HmgclP38060 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.88■□□□□ 0.29
HmgclP38060 Gm7791-201ENSMUST00000219066 539 ntBASIC16.88■□□□□ 0.29
HmgclP38060 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HmgclP38060 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HmgclP38060 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HmgclP38060 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HmgclP38060 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HmgclP38060 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.87■□□□□ 0.29
HmgclP38060 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HmgclP38060 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HmgclP38060 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.87■□□□□ 0.29
HmgclP38060 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HmgclP38060 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HmgclP38060 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HmgclP38060 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HmgclP38060 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.87■□□□□ 0.29
HmgclP38060 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.87■□□□□ 0.29
HmgclP38060 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HmgclP38060 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HmgclP38060 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HmgclP38060 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HmgclP38060 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HmgclP38060 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HmgclP38060 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HmgclP38060 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HmgclP38060 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HmgclP38060 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.87■□□□□ 0.29
HmgclP38060 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HmgclP38060 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HmgclP38060 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.86■□□□□ 0.29
HmgclP38060 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HmgclP38060 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HmgclP38060 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.86■□□□□ 0.29
HmgclP38060 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HmgclP38060 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.86■□□□□ 0.29
HmgclP38060 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.86■□□□□ 0.29
HmgclP38060 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HmgclP38060 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HmgclP38060 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HmgclP38060 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
HmgclP38060 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HmgclP38060 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HmgclP38060 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HmgclP38060 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.86■□□□□ 0.29
HmgclP38060 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HmgclP38060 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.86■□□□□ 0.29
HmgclP38060 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
HmgclP38060 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HmgclP38060 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HmgclP38060 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HmgclP38060 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HmgclP38060 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms