Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.08■□□□□ 0.32
LdlrP35951 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.08■□□□□ 0.32
LdlrP35951 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LdlrP35951 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LdlrP35951 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.08■□□□□ 0.32
LdlrP35951 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LdlrP35951 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LdlrP35951 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LdlrP35951 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LdlrP35951 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LdlrP35951 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LdlrP35951 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LdlrP35951 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LdlrP35951 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LdlrP35951 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LdlrP35951 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LdlrP35951 Gm13216-201ENSMUST00000117145 591 ntBASIC17.07■□□□□ 0.32
LdlrP35951 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.07■□□□□ 0.32
LdlrP35951 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LdlrP35951 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.07■□□□□ 0.32
LdlrP35951 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LdlrP35951 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LdlrP35951 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LdlrP35951 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LdlrP35951 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LdlrP35951 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LdlrP35951 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LdlrP35951 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LdlrP35951 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LdlrP35951 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LdlrP35951 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LdlrP35951 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 Gm13401-201ENSMUST00000117074 291 ntBASIC17.06■□□□□ 0.32
LdlrP35951 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LdlrP35951 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LdlrP35951 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LdlrP35951 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LdlrP35951 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.06■□□□□ 0.32
LdlrP35951 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LdlrP35951 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LdlrP35951 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LdlrP35951 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LdlrP35951 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LdlrP35951 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LdlrP35951 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LdlrP35951 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LdlrP35951 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LdlrP35951 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LdlrP35951 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LdlrP35951 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.05■□□□□ 0.32
LdlrP35951 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.05■□□□□ 0.32
LdlrP35951 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LdlrP35951 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LdlrP35951 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LdlrP35951 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LdlrP35951 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LdlrP35951 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LdlrP35951 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LdlrP35951 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LdlrP35951 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LdlrP35951 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LdlrP35951 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LdlrP35951 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LdlrP35951 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LdlrP35951 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LdlrP35951 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LdlrP35951 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LdlrP35951 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LdlrP35951 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LdlrP35951 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.04■□□□□ 0.32
LdlrP35951 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LdlrP35951 Gm18666-201ENSMUST00000190039 958 ntBASIC17.04■□□□□ 0.32
LdlrP35951 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LdlrP35951 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LdlrP35951 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LdlrP35951 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LdlrP35951 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LdlrP35951 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LdlrP35951 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LdlrP35951 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LdlrP35951 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms