Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp13P33435 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp13P33435 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp13P33435 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp13P33435 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.57■□□□□ 0.4
Mmp13P33435 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Mmp13P33435 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.57■□□□□ 0.4
Mmp13P33435 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.57■□□□□ 0.4
Mmp13P33435 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp13P33435 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp13P33435 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Mmp13P33435 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Mmp13P33435 Haglr-201ENSMUST00000100000 2085 ntBASIC17.57■□□□□ 0.4
Mmp13P33435 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp13P33435 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp13P33435 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp13P33435 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp13P33435 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp13P33435 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp13P33435 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp13P33435 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp13P33435 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp13P33435 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.56■□□□□ 0.4
Mmp13P33435 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.56■□□□□ 0.4
Mmp13P33435 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
Mmp13P33435 Mtag2-201ENSMUST00000058665 714 ntBASIC17.56■□□□□ 0.4
Mmp13P33435 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp13P33435 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp13P33435 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp13P33435 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Mmp13P33435 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp13P33435 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp13P33435 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp13P33435 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp13P33435 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Mmp13P33435 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp13P33435 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp13P33435 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp13P33435 Mir2861-201ENSMUST00000175539 82 ntBASIC17.55■□□□□ 0.4
Mmp13P33435 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.55■□□□□ 0.4
Mmp13P33435 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.55■□□□□ 0.4
Mmp13P33435 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Mmp13P33435 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp13P33435 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp13P33435 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp13P33435 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp13P33435 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp13P33435 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp13P33435 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp13P33435 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp13P33435 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp13P33435 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp13P33435 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp13P33435 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.54■□□□□ 0.4
Mmp13P33435 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.54■□□□□ 0.4
Mmp13P33435 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp13P33435 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp13P33435 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp13P33435 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp13P33435 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Mmp13P33435 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp13P33435 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp13P33435 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp13P33435 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp13P33435 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp13P33435 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp13P33435 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp13P33435 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Mmp13P33435 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Mmp13P33435 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Mmp13P33435 Gm13401-201ENSMUST00000117074 291 ntBASIC17.53■□□□□ 0.4
Mmp13P33435 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp13P33435 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.53■□□□□ 0.4
Mmp13P33435 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp13P33435 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp13P33435 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp13P33435 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp13P33435 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Mmp13P33435 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp13P33435 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp13P33435 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp13P33435 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp13P33435 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp13P33435 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp13P33435 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Mmp13P33435 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp13P33435 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp13P33435 Gm15378-201ENSMUST00000121894 207 ntBASIC17.52■□□□□ 0.4
Mmp13P33435 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.52■□□□□ 0.4
Mmp13P33435 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.52■□□□□ 0.4
Mmp13P33435 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp13P33435 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp13P33435 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp13P33435 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp13P33435 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp13P33435 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp13P33435 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp13P33435 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp13P33435 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp13P33435 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms