Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a13P31649 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a13P31649 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.41■□□□□ 0.38
Slc6a13P31649 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.41■□□□□ 0.38
Slc6a13P31649 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.41■□□□□ 0.38
Slc6a13P31649 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a13P31649 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a13P31649 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a13P31649 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a13P31649 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.41■□□□□ 0.38
Slc6a13P31649 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a13P31649 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a13P31649 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a13P31649 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a13P31649 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a13P31649 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a13P31649 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a13P31649 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a13P31649 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a13P31649 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Slc6a13P31649 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a13P31649 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a13P31649 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a13P31649 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.4■□□□□ 0.38
Slc6a13P31649 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a13P31649 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.4■□□□□ 0.38
Slc6a13P31649 Gm30025-201ENSMUST00000218555 728 ntBASIC17.4■□□□□ 0.38
Slc6a13P31649 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a13P31649 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.4■□□□□ 0.38
Slc6a13P31649 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a13P31649 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a13P31649 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a13P31649 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a13P31649 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a13P31649 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a13P31649 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a13P31649 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a13P31649 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Slc6a13P31649 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a13P31649 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a13P31649 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Slc6a13P31649 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a13P31649 Mir6982-201ENSMUST00000184354 68 ntBASIC17.39■□□□□ 0.37
Slc6a13P31649 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.39■□□□□ 0.37
Slc6a13P31649 Il3ra-202ENSMUST00000223589 738 ntBASIC17.39■□□□□ 0.37
Slc6a13P31649 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a13P31649 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a13P31649 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Slc6a13P31649 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a13P31649 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Slc6a13P31649 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a13P31649 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a13P31649 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a13P31649 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a13P31649 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Slc6a13P31649 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a13P31649 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a13P31649 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a13P31649 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a13P31649 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.39■□□□□ 0.37
Slc6a13P31649 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.39■□□□□ 0.37
Slc6a13P31649 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a13P31649 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a13P31649 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a13P31649 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a13P31649 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a13P31649 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a13P31649 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Slc6a13P31649 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a13P31649 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a13P31649 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a13P31649 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a13P31649 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.38■□□□□ 0.37
Slc6a13P31649 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a13P31649 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a13P31649 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a13P31649 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a13P31649 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a13P31649 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a13P31649 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a13P31649 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Slc6a13P31649 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.37■□□□□ 0.37
Slc6a13P31649 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Slc6a13P31649 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.37■□□□□ 0.37
Slc6a13P31649 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a13P31649 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a13P31649 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a13P31649 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a13P31649 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a13P31649 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Slc6a13P31649 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.37■□□□□ 0.37
Slc6a13P31649 Gm15565-201ENSMUST00000118890 427 ntBASIC17.37■□□□□ 0.37
Slc6a13P31649 Gm11539-201ENSMUST00000119837 557 ntBASIC17.37■□□□□ 0.37
Slc6a13P31649 Gm13436-201ENSMUST00000120418 567 ntBASIC17.37■□□□□ 0.37
Slc6a13P31649 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Slc6a13P31649 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Slc6a13P31649 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.37■□□□□ 0.37
Slc6a13P31649 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a13P31649 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a13P31649 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms