Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vcam1P29533 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.76■□□□□ 0.75
Vcam1P29533 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vcam1P29533 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vcam1P29533 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vcam1P29533 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vcam1P29533 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.76■□□□□ 0.75
Vcam1P29533 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Vcam1P29533 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vcam1P29533 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
Vcam1P29533 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vcam1P29533 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vcam1P29533 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vcam1P29533 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vcam1P29533 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vcam1P29533 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vcam1P29533 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vcam1P29533 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vcam1P29533 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vcam1P29533 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vcam1P29533 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Vcam1P29533 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vcam1P29533 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vcam1P29533 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vcam1P29533 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vcam1P29533 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Vcam1P29533 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.74■□□□□ 0.75
Vcam1P29533 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.74■□□□□ 0.75
Vcam1P29533 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vcam1P29533 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Vcam1P29533 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Vcam1P29533 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Vcam1P29533 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.74■□□□□ 0.75
Vcam1P29533 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.74■□□□□ 0.75
Vcam1P29533 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vcam1P29533 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vcam1P29533 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.74■□□□□ 0.75
Vcam1P29533 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vcam1P29533 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.74■□□□□ 0.75
Vcam1P29533 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vcam1P29533 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vcam1P29533 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vcam1P29533 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vcam1P29533 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vcam1P29533 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.74■□□□□ 0.75
Vcam1P29533 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Vcam1P29533 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Vcam1P29533 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcam1P29533 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcam1P29533 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcam1P29533 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcam1P29533 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcam1P29533 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcam1P29533 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Vcam1P29533 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcam1P29533 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcam1P29533 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcam1P29533 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Vcam1P29533 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcam1P29533 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcam1P29533 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcam1P29533 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcam1P29533 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcam1P29533 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcam1P29533 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vcam1P29533 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vcam1P29533 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vcam1P29533 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vcam1P29533 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.72■□□□□ 0.75
Vcam1P29533 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Vcam1P29533 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Vcam1P29533 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Vcam1P29533 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vcam1P29533 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.72■□□□□ 0.75
Vcam1P29533 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Vcam1P29533 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vcam1P29533 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Vcam1P29533 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vcam1P29533 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vcam1P29533 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vcam1P29533 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vcam1P29533 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Vcam1P29533 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vcam1P29533 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vcam1P29533 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vcam1P29533 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.71■□□□□ 0.75
Vcam1P29533 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vcam1P29533 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vcam1P29533 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vcam1P29533 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Vcam1P29533 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vcam1P29533 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vcam1P29533 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.71■□□□□ 0.75
Vcam1P29533 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vcam1P29533 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.71■□□□□ 0.75
Vcam1P29533 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vcam1P29533 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.71■□□□□ 0.75
Vcam1P29533 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vcam1P29533 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vcam1P29533 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms