Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp53P15975 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp53P15975 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp53P15975 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Usp53P15975 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp53P15975 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp53P15975 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp53P15975 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp53P15975 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp53P15975 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.85■□□□□ 0.77
Usp53P15975 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp53P15975 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp53P15975 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp53P15975 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp53P15975 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp53P15975 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp53P15975 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp53P15975 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp53P15975 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.84■□□□□ 0.77
Usp53P15975 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.84■□□□□ 0.77
Usp53P15975 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp53P15975 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Usp53P15975 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp53P15975 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp53P15975 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp53P15975 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp53P15975 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp53P15975 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp53P15975 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp53P15975 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp53P15975 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Usp53P15975 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Usp53P15975 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Usp53P15975 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp53P15975 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp53P15975 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Usp53P15975 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp53P15975 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Usp53P15975 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.83■□□□□ 0.76
Usp53P15975 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp53P15975 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Usp53P15975 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp53P15975 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp53P15975 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.83■□□□□ 0.76
Usp53P15975 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp53P15975 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp53P15975 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp53P15975 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
Usp53P15975 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp53P15975 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp53P15975 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp53P15975 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp53P15975 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp53P15975 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp53P15975 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp53P15975 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp53P15975 Gm27000-201ENSMUST00000182943 842 ntBASIC19.82■□□□□ 0.76
Usp53P15975 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.82■□□□□ 0.76
Usp53P15975 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Usp53P15975 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp53P15975 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp53P15975 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp53P15975 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Usp53P15975 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp53P15975 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp53P15975 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Usp53P15975 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp53P15975 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Usp53P15975 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Usp53P15975 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp53P15975 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Usp53P15975 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp53P15975 Actl10-202ENSMUST00000226583 1501 ntBASIC19.81■□□□□ 0.76
Usp53P15975 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp53P15975 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.81■□□□□ 0.76
Usp53P15975 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp53P15975 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.81■□□□□ 0.76
Usp53P15975 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp53P15975 Gm27389-201ENSMUST00000183622 195 ntBASIC19.81■□□□□ 0.76
Usp53P15975 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp53P15975 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp53P15975 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp53P15975 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp53P15975 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.81■□□□□ 0.76
Usp53P15975 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp53P15975 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp53P15975 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Usp53P15975 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp53P15975 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp53P15975 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp53P15975 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp53P15975 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp53P15975 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp53P15975 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp53P15975 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp53P15975 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp53P15975 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp53P15975 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp53P15975 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp53P15975 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms