Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h2P0C090 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h2P0C090 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h2P0C090 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h2P0C090 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h2P0C090 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.46■□□□□ 0.39
Rc3h2P0C090 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h2P0C090 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rc3h2P0C090 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
Rc3h2P0C090 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rc3h2P0C090 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h2P0C090 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Gm14859-201ENSMUST00000117752 357 ntBASIC17.45■□□□□ 0.38
Rc3h2P0C090 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Gm11355-201ENSMUST00000121120 306 ntBASIC17.45■□□□□ 0.38
Rc3h2P0C090 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h2P0C090 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h2P0C090 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Actl10-202ENSMUST00000226583 1501 ntBASIC17.44■□□□□ 0.38
Rc3h2P0C090 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h2P0C090 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h2P0C090 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rc3h2P0C090 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h2P0C090 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h2P0C090 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.43■□□□□ 0.38
Rc3h2P0C090 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.43■□□□□ 0.38
Rc3h2P0C090 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rc3h2P0C090 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rc3h2P0C090 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.43■□□□□ 0.38
Rc3h2P0C090 Gm29518-201ENSMUST00000190858 372 ntBASIC17.43■□□□□ 0.38
Rc3h2P0C090 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h2P0C090 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h2P0C090 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h2P0C090 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h2P0C090 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h2P0C090 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h2P0C090 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h2P0C090 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h2P0C090 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h2P0C090 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h2P0C090 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h2P0C090 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h2P0C090 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h2P0C090 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rc3h2P0C090 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h2P0C090 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h2P0C090 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.42■□□□□ 0.38
Rc3h2P0C090 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h2P0C090 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h2P0C090 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Rc3h2P0C090 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.42■□□□□ 0.38
Rc3h2P0C090 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h2P0C090 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.42■□□□□ 0.38
Rc3h2P0C090 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rc3h2P0C090 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h2P0C090 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h2P0C090 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.42■□□□□ 0.38
Rc3h2P0C090 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h2P0C090 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h2P0C090 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h2P0C090 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.41■□□□□ 0.38
Rc3h2P0C090 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms