Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sod1P08228 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sod1P08228 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.14■□□□□ 0.17
Sod1P08228 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.14■□□□□ 0.17
Sod1P08228 Gm44771-201ENSMUST00000206975 626 ntBASIC16.14■□□□□ 0.17
Sod1P08228 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sod1P08228 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sod1P08228 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sod1P08228 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.14■□□□□ 0.17
Sod1P08228 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sod1P08228 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sod1P08228 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Sod1P08228 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sod1P08228 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sod1P08228 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sod1P08228 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sod1P08228 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sod1P08228 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sod1P08228 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sod1P08228 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.13■□□□□ 0.17
Sod1P08228 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sod1P08228 Gm12895-201ENSMUST00000122214 226 ntBASIC16.13■□□□□ 0.17
Sod1P08228 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sod1P08228 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.13■□□□□ 0.17
Sod1P08228 Gm44450-201ENSMUST00000199528 114 ntBASIC16.13■□□□□ 0.17
Sod1P08228 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sod1P08228 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sod1P08228 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Sod1P08228 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sod1P08228 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Sod1P08228 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Sod1P08228 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.12■□□□□ 0.17
Sod1P08228 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.12■□□□□ 0.17
Sod1P08228 Gm27459-201ENSMUST00000184860 107 ntBASIC16.12■□□□□ 0.17
Sod1P08228 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.12■□□□□ 0.17
Sod1P08228 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.12■□□□□ 0.17
Sod1P08228 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.12■□□□□ 0.17
Sod1P08228 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Sod1P08228 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Sod1P08228 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.12■□□□□ 0.17
Sod1P08228 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sod1P08228 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sod1P08228 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sod1P08228 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.11■□□□□ 0.17
Sod1P08228 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sod1P08228 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sod1P08228 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sod1P08228 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sod1P08228 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sod1P08228 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.11■□□□□ 0.17
Sod1P08228 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Sod1P08228 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.11■□□□□ 0.17
Sod1P08228 Mzt1-203ENSMUST00000227948 952 ntBASIC16.11■□□□□ 0.17
Sod1P08228 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.11■□□□□ 0.17
Sod1P08228 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sod1P08228 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sod1P08228 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sod1P08228 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sod1P08228 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.1■□□□□ 0.17
Sod1P08228 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sod1P08228 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sod1P08228 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sod1P08228 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sod1P08228 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.1■□□□□ 0.17
Sod1P08228 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sod1P08228 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.1■□□□□ 0.17
Sod1P08228 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sod1P08228 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sod1P08228 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Sod1P08228 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sod1P08228 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.1■□□□□ 0.17
Sod1P08228 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sod1P08228 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sod1P08228 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.1■□□□□ 0.17
Sod1P08228 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sod1P08228 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sod1P08228 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.09■□□□□ 0.17
Sod1P08228 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sod1P08228 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sod1P08228 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms