Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm7791-201ENSMUST00000219066 539 ntBASIC15.3■□□□□ 0.04
P06344 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06344 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06344 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06344 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06344 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06344 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06344 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06344 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06344 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06344 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P06344 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.29■□□□□ 0.04
P06344 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.29■□□□□ 0.04
P06344 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06344 Gm9731-201ENSMUST00000209480 747 ntBASIC15.29■□□□□ 0.04
P06344 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
P06344 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06344 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06344 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06344 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06344 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06344 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06344 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06344 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P06344 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06344 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.28■□□□□ 0.04
P06344 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
P06344 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P06344 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.28■□□□□ 0.04
P06344 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.28■□□□□ 0.04
P06344 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06344 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
P06344 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06344 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
P06344 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06344 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06344 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06344 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06344 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P06344 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.28■□□□□ 0.04
P06344 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06344 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
P06344 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06344 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
P06344 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06344 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06344 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06344 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06344 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.27■□□□□ 0.04
P06344 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06344 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.27■□□□□ 0.04
P06344 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
P06344 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06344 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06344 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
P06344 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06344 Gm7977-201ENSMUST00000193787 748 ntBASIC15.27■□□□□ 0.04
P06344 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
P06344 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06344 Gm18959-201ENSMUST00000208954 655 ntBASIC15.27■□□□□ 0.04
P06344 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
P06344 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06344 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06344 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
P06344 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P06344 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P06344 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
P06344 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
P06344 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P06344 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P06344 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.27■□□□□ 0.03
P06344 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06344 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.26■□□□□ 0.03
P06344 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06344 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06344 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06344 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.26■□□□□ 0.03
P06344 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
P06344 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06344 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P06344 Gm2274-201ENSMUST00000184539 609 ntBASIC15.26■□□□□ 0.03
P06344 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.26■□□□□ 0.03
P06344 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P06344 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06344 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06344 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06344 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.26■□□□□ 0.03
P06344 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06344 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06344 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.26■□□□□ 0.03
P06344 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06344 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
P06344 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06344 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06344 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06344 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P06344 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.25■□□□□ 0.03
P06344 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P06344 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06344 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms