Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PrnpP04925 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PrnpP04925 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
PrnpP04925 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
PrnpP04925 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PrnpP04925 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.8■□□□□ 0.44
PrnpP04925 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.8■□□□□ 0.44
PrnpP04925 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PrnpP04925 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.8■□□□□ 0.44
PrnpP04925 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PrnpP04925 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PrnpP04925 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PrnpP04925 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
PrnpP04925 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PrnpP04925 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PrnpP04925 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PrnpP04925 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PrnpP04925 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PrnpP04925 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PrnpP04925 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PrnpP04925 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PrnpP04925 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PrnpP04925 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PrnpP04925 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.79■□□□□ 0.44
PrnpP04925 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.79■□□□□ 0.44
PrnpP04925 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PrnpP04925 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PrnpP04925 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PrnpP04925 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PrnpP04925 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
PrnpP04925 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PrnpP04925 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PrnpP04925 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PrnpP04925 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PrnpP04925 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PrnpP04925 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PrnpP04925 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PrnpP04925 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.78■□□□□ 0.44
PrnpP04925 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PrnpP04925 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.78■□□□□ 0.44
PrnpP04925 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
PrnpP04925 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
PrnpP04925 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
PrnpP04925 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.78■□□□□ 0.44
PrnpP04925 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PrnpP04925 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PrnpP04925 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PrnpP04925 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PrnpP04925 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PrnpP04925 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PrnpP04925 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PrnpP04925 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PrnpP04925 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PrnpP04925 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PrnpP04925 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PrnpP04925 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PrnpP04925 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PrnpP04925 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PrnpP04925 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PrnpP04925 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.77■□□□□ 0.44
PrnpP04925 Gm34391-201ENSMUST00000203706 907 ntBASIC17.77■□□□□ 0.44
PrnpP04925 Gm44771-201ENSMUST00000206975 626 ntBASIC17.77■□□□□ 0.44
PrnpP04925 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PrnpP04925 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PrnpP04925 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PrnpP04925 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PrnpP04925 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PrnpP04925 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PrnpP04925 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PrnpP04925 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.76■□□□□ 0.43
PrnpP04925 Gm13186-201ENSMUST00000118031 316 ntBASIC17.76■□□□□ 0.43
PrnpP04925 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.76■□□□□ 0.43
PrnpP04925 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PrnpP04925 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.76■□□□□ 0.43
PrnpP04925 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PrnpP04925 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.76■□□□□ 0.43
PrnpP04925 Birc2-201ENSMUST00000054878 378 ntBASIC17.76■□□□□ 0.43
PrnpP04925 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PrnpP04925 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PrnpP04925 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PrnpP04925 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PrnpP04925 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PrnpP04925 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PrnpP04925 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PrnpP04925 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
PrnpP04925 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.75■□□□□ 0.43
PrnpP04925 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PrnpP04925 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PrnpP04925 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PrnpP04925 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PrnpP04925 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
PrnpP04925 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PrnpP04925 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PrnpP04925 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PrnpP04925 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PrnpP04925 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PrnpP04925 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PrnpP04925 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PrnpP04925 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PrnpP04925 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms