Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P01734 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.68■□□□□ 0.58
P01734 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.68■□□□□ 0.58
P01734 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.68■□□□□ 0.58
P01734 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
P01734 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.68■□□□□ 0.58
P01734 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P01734 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01734 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P01734 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01734 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01734 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
P01734 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01734 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.67■□□□□ 0.58
P01734 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01734 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01734 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P01734 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P01734 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P01734 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.67■□□□□ 0.58
P01734 Gm7370-201ENSMUST00000219471 767 ntBASIC18.67■□□□□ 0.58
P01734 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01734 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P01734 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01734 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P01734 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
P01734 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.67■□□□□ 0.58
P01734 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.67■□□□□ 0.58
P01734 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01734 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01734 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
P01734 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01734 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01734 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
P01734 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01734 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01734 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
P01734 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
P01734 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01734 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01734 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01734 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01734 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01734 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.66■□□□□ 0.58
P01734 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.65■□□□□ 0.58
P01734 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01734 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01734 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01734 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01734 Gm16061-201ENSMUST00000122167 857 ntBASIC18.65■□□□□ 0.58
P01734 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.65■□□□□ 0.58
P01734 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01734 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01734 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.65■□□□□ 0.58
P01734 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
P01734 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
P01734 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01734 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
P01734 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
P01734 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
P01734 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01734 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.65■□□□□ 0.58
P01734 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01734 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
P01734 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
P01734 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
P01734 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
P01734 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
P01734 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
P01734 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
P01734 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
P01734 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01734 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01734 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
P01734 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01734 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01734 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
P01734 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.64■□□□□ 0.57
P01734 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01734 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.64■□□□□ 0.57
P01734 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
P01734 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
P01734 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01734 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01734 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
P01734 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01734 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
P01734 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01734 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01734 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.64■□□□□ 0.57
P01734 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01734 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.64■□□□□ 0.57
P01734 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
P01734 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01734 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01734 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01734 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01734 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
P01734 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01734 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms