Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.99■□□□□ 0.47
Ttc3O88196 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc3O88196 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc3O88196 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Ttc3O88196 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ttc3O88196 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc3O88196 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc3O88196 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc3O88196 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc3O88196 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc3O88196 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.99■□□□□ 0.47
Ttc3O88196 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc3O88196 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc3O88196 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc3O88196 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ttc3O88196 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.99■□□□□ 0.47
Ttc3O88196 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc3O88196 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc3O88196 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc3O88196 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc3O88196 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc3O88196 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc3O88196 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc3O88196 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc3O88196 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc3O88196 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc3O88196 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.98■□□□□ 0.47
Ttc3O88196 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.98■□□□□ 0.47
Ttc3O88196 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc3O88196 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.98■□□□□ 0.47
Ttc3O88196 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc3O88196 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc3O88196 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc3O88196 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ttc3O88196 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc3O88196 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.97■□□□□ 0.47
Ttc3O88196 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.97■□□□□ 0.47
Ttc3O88196 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc3O88196 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.97■□□□□ 0.47
Ttc3O88196 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Ttc3O88196 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc3O88196 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc3O88196 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc3O88196 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc3O88196 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc3O88196 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.97■□□□□ 0.47
Ttc3O88196 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc3O88196 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc3O88196 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc3O88196 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc3O88196 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc3O88196 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ttc3O88196 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc3O88196 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc3O88196 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Ttc3O88196 Gm18669-201ENSMUST00000216049 778 ntBASIC17.97■□□□□ 0.47
Ttc3O88196 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.97■□□□□ 0.47
Ttc3O88196 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc3O88196 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc3O88196 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc3O88196 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc3O88196 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc3O88196 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc3O88196 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.96■□□□□ 0.47
Ttc3O88196 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ttc3O88196 Gm27357-201ENSMUST00000183754 135 ntBASIC17.96■□□□□ 0.47
Ttc3O88196 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.96■□□□□ 0.47
Ttc3O88196 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc3O88196 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc3O88196 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc3O88196 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Ttc3O88196 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc3O88196 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc3O88196 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc3O88196 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc3O88196 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ttc3O88196 Gm13186-201ENSMUST00000118031 316 ntBASIC17.95■□□□□ 0.46
Ttc3O88196 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ttc3O88196 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ttc3O88196 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ttc3O88196 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ttc3O88196 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.95■□□□□ 0.46
Ttc3O88196 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ttc3O88196 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ttc3O88196 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ttc3O88196 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ttc3O88196 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ttc3O88196 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Ttc3O88196 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.94■□□□□ 0.46
Ttc3O88196 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ttc3O88196 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ttc3O88196 Gm44450-201ENSMUST00000199528 114 ntBASIC17.94■□□□□ 0.46
Ttc3O88196 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ttc3O88196 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ttc3O88196 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ttc3O88196 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ttc3O88196 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ttc3O88196 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ttc3O88196 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.94■□□□□ 0.46
Ttc3O88196 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms