Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim1O70400 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim1O70400 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim1O70400 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim1O70400 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.93■□□□□ 0.3
Pdlim1O70400 Gm2274-201ENSMUST00000184539 609 ntBASIC16.93■□□□□ 0.3
Pdlim1O70400 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.93■□□□□ 0.3
Pdlim1O70400 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Pdlim1O70400 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pdlim1O70400 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.93■□□□□ 0.3
Pdlim1O70400 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.93■□□□□ 0.3
Pdlim1O70400 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim1O70400 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pdlim1O70400 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim1O70400 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pdlim1O70400 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim1O70400 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim1O70400 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim1O70400 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim1O70400 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim1O70400 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Pdlim1O70400 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim1O70400 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim1O70400 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Pdlim1O70400 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim1O70400 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.92■□□□□ 0.3
Pdlim1O70400 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Pdlim1O70400 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim1O70400 Gm43799-201ENSMUST00000201845 579 ntBASIC16.92■□□□□ 0.3
Pdlim1O70400 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.92■□□□□ 0.3
Pdlim1O70400 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim1O70400 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.92■□□□□ 0.3
Pdlim1O70400 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim1O70400 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim1O70400 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Pdlim1O70400 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim1O70400 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.92■□□□□ 0.3
Pdlim1O70400 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim1O70400 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim1O70400 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.91■□□□□ 0.3
Pdlim1O70400 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim1O70400 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim1O70400 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim1O70400 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim1O70400 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pdlim1O70400 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim1O70400 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim1O70400 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim1O70400 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.91■□□□□ 0.3
Pdlim1O70400 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim1O70400 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim1O70400 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Pdlim1O70400 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pdlim1O70400 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim1O70400 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim1O70400 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim1O70400 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim1O70400 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pdlim1O70400 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pdlim1O70400 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim1O70400 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim1O70400 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim1O70400 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim1O70400 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim1O70400 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim1O70400 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim1O70400 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim1O70400 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim1O70400 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim1O70400 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.9■□□□□ 0.3
Pdlim1O70400 Gm6433-201ENSMUST00000118634 875 ntBASIC16.9■□□□□ 0.3
Pdlim1O70400 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.9■□□□□ 0.3
Pdlim1O70400 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.9■□□□□ 0.3
Pdlim1O70400 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.9■□□□□ 0.3
Pdlim1O70400 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.9■□□□□ 0.3
Pdlim1O70400 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.9■□□□□ 0.3
Pdlim1O70400 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim1O70400 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim1O70400 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim1O70400 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim1O70400 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Pdlim1O70400 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim1O70400 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim1O70400 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim1O70400 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pdlim1O70400 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.89■□□□□ 0.29
Pdlim1O70400 Gm13474-201ENSMUST00000122466 815 ntBASIC16.89■□□□□ 0.29
Pdlim1O70400 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Pdlim1O70400 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim1O70400 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim1O70400 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Pdlim1O70400 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.89■□□□□ 0.29
Pdlim1O70400 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim1O70400 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim1O70400 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim1O70400 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim1O70400 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim1O70400 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pdlim1O70400 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim1O70400 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms