Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim3O70209 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim3O70209 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pdlim3O70209 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim3O70209 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim3O70209 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim3O70209 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim3O70209 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim3O70209 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pdlim3O70209 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim3O70209 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim3O70209 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim3O70209 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.57■□□□□ 0.08
Pdlim3O70209 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pdlim3O70209 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim3O70209 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pdlim3O70209 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim3O70209 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Pdlim3O70209 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim3O70209 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim3O70209 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.57■□□□□ 0.08
Pdlim3O70209 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim3O70209 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.57■□□□□ 0.08
Pdlim3O70209 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim3O70209 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim3O70209 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim3O70209 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim3O70209 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim3O70209 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pdlim3O70209 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.56■□□□□ 0.08
Pdlim3O70209 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim3O70209 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.56■□□□□ 0.08
Pdlim3O70209 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pdlim3O70209 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim3O70209 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim3O70209 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim3O70209 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.56■□□□□ 0.08
Pdlim3O70209 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim3O70209 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.56■□□□□ 0.08
Pdlim3O70209 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.56■□□□□ 0.08
Pdlim3O70209 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.56■□□□□ 0.08
Pdlim3O70209 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim3O70209 Gm5874-201ENSMUST00000096101 508 ntBASIC15.56■□□□□ 0.08
Pdlim3O70209 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.56■□□□□ 0.08
Pdlim3O70209 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim3O70209 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim3O70209 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.56■□□□□ 0.08
Pdlim3O70209 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim3O70209 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim3O70209 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pdlim3O70209 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim3O70209 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim3O70209 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim3O70209 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim3O70209 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim3O70209 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim3O70209 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.55■□□□□ 0.08
Pdlim3O70209 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim3O70209 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim3O70209 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim3O70209 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.55■□□□□ 0.08
Pdlim3O70209 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim3O70209 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.55■□□□□ 0.08
Pdlim3O70209 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pdlim3O70209 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.55■□□□□ 0.08
Pdlim3O70209 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim3O70209 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim3O70209 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim3O70209 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim3O70209 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim3O70209 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim3O70209 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim3O70209 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.54■□□□□ 0.08
Pdlim3O70209 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.54■□□□□ 0.08
Pdlim3O70209 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.54■□□□□ 0.08
Pdlim3O70209 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Gm11927-201ENSMUST00000118472 759 ntBASIC15.54■□□□□ 0.08
Pdlim3O70209 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.54■□□□□ 0.08
Pdlim3O70209 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.54■□□□□ 0.08
Pdlim3O70209 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pdlim3O70209 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms