Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Copb2O55029 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Copb2O55029 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Copb2O55029 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Copb2O55029 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Copb2O55029 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Copb2O55029 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Copb2O55029 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Copb2O55029 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Copb2O55029 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Copb2O55029 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Copb2O55029 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.7■□□□□ 0.74
Copb2O55029 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Copb2O55029 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Copb2O55029 Gm18958-201ENSMUST00000174258 762 ntBASIC19.7■□□□□ 0.74
Copb2O55029 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.7■□□□□ 0.74
Copb2O55029 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Copb2O55029 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Copb2O55029 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Copb2O55029 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Copb2O55029 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Copb2O55029 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Copb2O55029 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Copb2O55029 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Copb2O55029 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.69■□□□□ 0.74
Copb2O55029 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Copb2O55029 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Copb2O55029 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Copb2O55029 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Copb2O55029 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Copb2O55029 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Copb2O55029 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.69■□□□□ 0.74
Copb2O55029 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Copb2O55029 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.69■□□□□ 0.74
Copb2O55029 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Copb2O55029 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Copb2O55029 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Copb2O55029 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Copb2O55029 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Copb2O55029 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Copb2O55029 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Copb2O55029 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb2O55029 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Copb2O55029 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Copb2O55029 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb2O55029 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.68■□□□□ 0.74
Copb2O55029 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Copb2O55029 Gm25016-201ENSMUST00000158399 131 ntBASIC19.68■□□□□ 0.74
Copb2O55029 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb2O55029 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb2O55029 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb2O55029 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb2O55029 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb2O55029 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb2O55029 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb2O55029 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb2O55029 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Copb2O55029 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Copb2O55029 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Copb2O55029 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Copb2O55029 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Copb2O55029 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Copb2O55029 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.67■□□□□ 0.74
Copb2O55029 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.67■□□□□ 0.74
Copb2O55029 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Copb2O55029 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Copb2O55029 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Copb2O55029 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Copb2O55029 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Copb2O55029 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Copb2O55029 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Copb2O55029 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Copb2O55029 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Copb2O55029 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Copb2O55029 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Copb2O55029 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Copb2O55029 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Copb2O55029 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Copb2O55029 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Copb2O55029 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Copb2O55029 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Copb2O55029 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Copb2O55029 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Copb2O55029 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Copb2O55029 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Copb2O55029 Gm26039-201ENSMUST00000158152 144 ntBASIC19.66■□□□□ 0.74
Copb2O55029 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Copb2O55029 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.66■□□□□ 0.74
Copb2O55029 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.66■□□□□ 0.74
Copb2O55029 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.66■□□□□ 0.74
Copb2O55029 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Copb2O55029 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Copb2O55029 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Copb2O55029 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Copb2O55029 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Copb2O55029 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.66■□□□□ 0.74
Copb2O55029 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Copb2O55029 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Copb2O55029 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Copb2O55029 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms