Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cntnap1O54991 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cntnap1O54991 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC22.21■■□□□ 1.15
Cntnap1O54991 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC22.21■■□□□ 1.15
Cntnap1O54991 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC22.21■■□□□ 1.15
Cntnap1O54991 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Cntnap1O54991 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC22.21■■□□□ 1.15
Cntnap1O54991 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cntnap1O54991 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC22.2■■□□□ 1.15
Cntnap1O54991 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cntnap1O54991 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Cntnap1O54991 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Cntnap1O54991 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Cntnap1O54991 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC22.2■■□□□ 1.14
Cntnap1O54991 Gm18421-201ENSMUST00000204122 625 ntBASIC22.2■■□□□ 1.14
Cntnap1O54991 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cntnap1O54991 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC22.2■■□□□ 1.14
Cntnap1O54991 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Cntnap1O54991 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Cntnap1O54991 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cntnap1O54991 Gm34220-201ENSMUST00000223001 2709 ntBASIC22.19■■□□□ 1.14
Cntnap1O54991 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cntnap1O54991 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cntnap1O54991 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cntnap1O54991 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cntnap1O54991 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cntnap1O54991 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC22.19■■□□□ 1.14
Cntnap1O54991 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cntnap1O54991 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cntnap1O54991 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cntnap1O54991 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cntnap1O54991 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cntnap1O54991 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cntnap1O54991 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cntnap1O54991 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Cntnap1O54991 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
Cntnap1O54991 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cntnap1O54991 AA543401-201ENSMUST00000164248 1269 ntBASIC22.18■■□□□ 1.14
Cntnap1O54991 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cntnap1O54991 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cntnap1O54991 AC174742.1-201ENSMUST00000218272 304 ntBASIC22.18■■□□□ 1.14
Cntnap1O54991 AC154757.1-201ENSMUST00000228289 336 ntBASIC22.18■■□□□ 1.14
Cntnap1O54991 Gm19721-201ENSMUST00000195284 1764 ntBASIC22.18■■□□□ 1.14
Cntnap1O54991 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cntnap1O54991 Gm7856-201ENSMUST00000117514 1493 ntBASIC22.18■■□□□ 1.14
Cntnap1O54991 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cntnap1O54991 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cntnap1O54991 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cntnap1O54991 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cntnap1O54991 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC22.17■■□□□ 1.14
Cntnap1O54991 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cntnap1O54991 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cntnap1O54991 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cntnap1O54991 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Cntnap1O54991 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Cntnap1O54991 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cntnap1O54991 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC22.17■■□□□ 1.14
Cntnap1O54991 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cntnap1O54991 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cntnap1O54991 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cntnap1O54991 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Cntnap1O54991 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cntnap1O54991 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cntnap1O54991 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Cntnap1O54991 Gm13616-201ENSMUST00000120600 222 ntBASIC22.16■■□□□ 1.14
Cntnap1O54991 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Cntnap1O54991 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC22.16■■□□□ 1.14
Cntnap1O54991 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Cntnap1O54991 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cntnap1O54991 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cntnap1O54991 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC22.15■■□□□ 1.14
Cntnap1O54991 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC22.15■■□□□ 1.14
Cntnap1O54991 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cntnap1O54991 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cntnap1O54991 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cntnap1O54991 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cntnap1O54991 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cntnap1O54991 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Cntnap1O54991 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cntnap1O54991 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC22.14■■□□□ 1.14
Cntnap1O54991 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Cntnap1O54991 Gm11780-201ENSMUST00000136880 516 ntBASIC22.14■■□□□ 1.14
Cntnap1O54991 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.14
Cntnap1O54991 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Cntnap1O54991 Gm20949-201ENSMUST00000206478 952 ntBASIC22.14■■□□□ 1.14
Cntnap1O54991 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cntnap1O54991 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC22.13■■□□□ 1.13
Cntnap1O54991 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Cntnap1O54991 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
Cntnap1O54991 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cntnap1O54991 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Cntnap1O54991 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Cntnap1O54991 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cntnap1O54991 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cntnap1O54991 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cntnap1O54991 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cntnap1O54991 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cntnap1O54991 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cntnap1O54991 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cntnap1O54991 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC22.12■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms