Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf13O54965 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf13O54965 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf13O54965 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf13O54965 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf13O54965 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf13O54965 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rnf13O54965 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rnf13O54965 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.57■□□□□ 0.08
Rnf13O54965 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf13O54965 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf13O54965 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf13O54965 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf13O54965 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf13O54965 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf13O54965 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf13O54965 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.57■□□□□ 0.08
Rnf13O54965 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf13O54965 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf13O54965 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rnf13O54965 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf13O54965 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.57■□□□□ 0.08
Rnf13O54965 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.57■□□□□ 0.08
Rnf13O54965 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf13O54965 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.56■□□□□ 0.08
Rnf13O54965 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rnf13O54965 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.56■□□□□ 0.08
Rnf13O54965 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Rnf13O54965 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.56■□□□□ 0.08
Rnf13O54965 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.56■□□□□ 0.08
Rnf13O54965 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Rnf13O54965 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.56■□□□□ 0.08
Rnf13O54965 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf13O54965 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Rnf13O54965 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf13O54965 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf13O54965 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf13O54965 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf13O54965 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf13O54965 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf13O54965 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf13O54965 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf13O54965 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf13O54965 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf13O54965 Gm10849-201ENSMUST00000100397 618 ntBASIC15.55■□□□□ 0.08
Rnf13O54965 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.55■□□□□ 0.08
Rnf13O54965 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.55■□□□□ 0.08
Rnf13O54965 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Rnf13O54965 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Rnf13O54965 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf13O54965 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf13O54965 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf13O54965 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf13O54965 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf13O54965 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf13O54965 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf13O54965 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf13O54965 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf13O54965 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf13O54965 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf13O54965 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf13O54965 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Rnf13O54965 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf13O54965 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.54■□□□□ 0.08
Rnf13O54965 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.54■□□□□ 0.08
Rnf13O54965 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rnf13O54965 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.54■□□□□ 0.08
Rnf13O54965 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf13O54965 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf13O54965 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.54■□□□□ 0.08
Rnf13O54965 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf13O54965 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Rnf13O54965 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.54■□□□□ 0.08
Rnf13O54965 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Rnf13O54965 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf13O54965 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf13O54965 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf13O54965 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf13O54965 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rnf13O54965 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms