Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc4O35988 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sdc4O35988 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Sdc4O35988 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc4O35988 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc4O35988 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc4O35988 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc4O35988 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sdc4O35988 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc4O35988 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.69■□□□□ 0.42
Sdc4O35988 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Sdc4O35988 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.69■□□□□ 0.42
Sdc4O35988 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.69■□□□□ 0.42
Sdc4O35988 Gm7213-201ENSMUST00000215977 950 ntBASIC17.69■□□□□ 0.42
Sdc4O35988 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc4O35988 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sdc4O35988 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc4O35988 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc4O35988 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc4O35988 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc4O35988 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc4O35988 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc4O35988 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc4O35988 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc4O35988 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc4O35988 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sdc4O35988 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sdc4O35988 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.68■□□□□ 0.42
Sdc4O35988 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.68■□□□□ 0.42
Sdc4O35988 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc4O35988 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc4O35988 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc4O35988 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.68■□□□□ 0.42
Sdc4O35988 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
Sdc4O35988 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc4O35988 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.67■□□□□ 0.42
Sdc4O35988 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.67■□□□□ 0.42
Sdc4O35988 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc4O35988 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc4O35988 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc4O35988 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc4O35988 Gm18958-201ENSMUST00000174258 762 ntBASIC17.67■□□□□ 0.42
Sdc4O35988 Gm21559-201ENSMUST00000220638 855 ntBASIC17.67■□□□□ 0.42
Sdc4O35988 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc4O35988 Gm8587-201ENSMUST00000076538 843 ntBASIC17.67■□□□□ 0.42
Sdc4O35988 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc4O35988 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.67■□□□□ 0.42
Sdc4O35988 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc4O35988 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc4O35988 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.67■□□□□ 0.42
Sdc4O35988 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc4O35988 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc4O35988 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc4O35988 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc4O35988 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc4O35988 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc4O35988 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Sdc4O35988 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.66■□□□□ 0.42
Sdc4O35988 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc4O35988 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Sdc4O35988 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc4O35988 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Sdc4O35988 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc4O35988 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Sdc4O35988 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc4O35988 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.66■□□□□ 0.42
Sdc4O35988 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Sdc4O35988 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Sdc4O35988 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc4O35988 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Sdc4O35988 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc4O35988 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc4O35988 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc4O35988 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc4O35988 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc4O35988 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc4O35988 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc4O35988 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.65■□□□□ 0.42
Sdc4O35988 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc4O35988 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Sdc4O35988 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Sdc4O35988 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Sdc4O35988 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc4O35988 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc4O35988 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.65■□□□□ 0.42
Sdc4O35988 Gm25016-201ENSMUST00000158399 131 ntBASIC17.65■□□□□ 0.42
Sdc4O35988 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.65■□□□□ 0.42
Sdc4O35988 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.65■□□□□ 0.42
Sdc4O35988 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc4O35988 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc4O35988 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc4O35988 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc4O35988 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Sdc4O35988 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sdc4O35988 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Sdc4O35988 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sdc4O35988 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sdc4O35988 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sdc4O35988 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc4O35988 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms