Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Per1O35973 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Per1O35973 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.62■□□□□ 0.57
Per1O35973 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Per1O35973 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Per1O35973 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Per1O35973 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Per1O35973 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Per1O35973 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Per1O35973 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Per1O35973 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Per1O35973 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Per1O35973 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Per1O35973 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Per1O35973 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Per1O35973 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.61■□□□□ 0.57
Per1O35973 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Per1O35973 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Per1O35973 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Per1O35973 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Per1O35973 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Per1O35973 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Per1O35973 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Per1O35973 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Per1O35973 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Per1O35973 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.6■□□□□ 0.57
Per1O35973 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.6■□□□□ 0.57
Per1O35973 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Per1O35973 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.6■□□□□ 0.57
Per1O35973 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.6■□□□□ 0.57
Per1O35973 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.6■□□□□ 0.57
Per1O35973 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per1O35973 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Per1O35973 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Per1O35973 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Per1O35973 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Per1O35973 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Per1O35973 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Per1O35973 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Per1O35973 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Per1O35973 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Per1O35973 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Per1O35973 Gm11355-201ENSMUST00000121120 306 ntBASIC18.59■□□□□ 0.57
Per1O35973 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Per1O35973 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Per1O35973 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Per1O35973 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Per1O35973 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Per1O35973 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Per1O35973 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Per1O35973 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Per1O35973 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Per1O35973 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Per1O35973 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.58■□□□□ 0.57
Per1O35973 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Per1O35973 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Per1O35973 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.58■□□□□ 0.56
Per1O35973 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Per1O35973 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Per1O35973 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Per1O35973 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Per1O35973 AA414768-201ENSMUST00000121924 1257 ntBASIC18.58■□□□□ 0.56
Per1O35973 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Per1O35973 Gm9013-201ENSMUST00000132939 882 ntBASIC18.58■□□□□ 0.56
Per1O35973 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Per1O35973 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.58■□□□□ 0.56
Per1O35973 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.58■□□□□ 0.56
Per1O35973 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.58■□□□□ 0.56
Per1O35973 Gm5587-201ENSMUST00000206270 674 ntBASIC18.58■□□□□ 0.56
Per1O35973 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Per1O35973 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Per1O35973 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Per1O35973 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Per1O35973 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Per1O35973 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.58■□□□□ 0.56
Per1O35973 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Per1O35973 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms