Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm2O35900 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm2O35900 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm2O35900 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm2O35900 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Lsm2O35900 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm2O35900 Gm2399-201ENSMUST00000104944 225 ntBASIC15.31■□□□□ 0.04
Lsm2O35900 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm2O35900 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.31■□□□□ 0.04
Lsm2O35900 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.31■□□□□ 0.04
Lsm2O35900 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm2O35900 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm2O35900 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm2O35900 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm2O35900 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Lsm2O35900 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm2O35900 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm2O35900 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm2O35900 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm2O35900 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm2O35900 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm2O35900 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm2O35900 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm2O35900 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm2O35900 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm2O35900 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm2O35900 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm2O35900 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm2O35900 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm2O35900 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Lsm2O35900 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.3■□□□□ 0.04
Lsm2O35900 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.3■□□□□ 0.04
Lsm2O35900 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm2O35900 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.3■□□□□ 0.04
Lsm2O35900 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm2O35900 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm2O35900 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Lsm2O35900 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Lsm2O35900 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm2O35900 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm2O35900 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm2O35900 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm2O35900 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm2O35900 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm2O35900 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm2O35900 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Lsm2O35900 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm2O35900 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm2O35900 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm2O35900 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm2O35900 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm2O35900 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm2O35900 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Lsm2O35900 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.29■□□□□ 0.04
Lsm2O35900 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Lsm2O35900 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm2O35900 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm2O35900 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm2O35900 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm2O35900 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm2O35900 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Lsm2O35900 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm2O35900 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm2O35900 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Lsm2O35900 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm2O35900 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm2O35900 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm2O35900 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lsm2O35900 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Lsm2O35900 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lsm2O35900 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm2O35900 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lsm2O35900 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lsm2O35900 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm2O35900 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm2O35900 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm2O35900 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm2O35900 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.28■□□□□ 0.04
Lsm2O35900 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm2O35900 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Lsm2O35900 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm2O35900 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm2O35900 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm2O35900 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Lsm2O35900 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.28■□□□□ 0.04
Lsm2O35900 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm2O35900 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm2O35900 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm2O35900 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm2O35900 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Lsm2O35900 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm2O35900 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lsm2O35900 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm2O35900 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm2O35900 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm2O35900 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm2O35900 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm2O35900 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.27■□□□□ 0.04
Lsm2O35900 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm2O35900 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms