Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc1a4O35874 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Slc1a4O35874 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.15■□□□□ 0.82
Slc1a4O35874 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc1a4O35874 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc1a4O35874 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc1a4O35874 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc1a4O35874 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.15■□□□□ 0.82
Slc1a4O35874 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Slc1a4O35874 Gm7977-201ENSMUST00000193787 748 ntBASIC20.15■□□□□ 0.82
Slc1a4O35874 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc1a4O35874 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc1a4O35874 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Slc1a4O35874 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc1a4O35874 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Slc1a4O35874 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc1a4O35874 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Slc1a4O35874 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc1a4O35874 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Slc1a4O35874 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Slc1a4O35874 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slc1a4O35874 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.14■□□□□ 0.81
Slc1a4O35874 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Slc1a4O35874 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc1a4O35874 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Slc1a4O35874 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc1a4O35874 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc1a4O35874 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Slc1a4O35874 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Slc1a4O35874 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Slc1a4O35874 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.14■□□□□ 0.81
Slc1a4O35874 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.14■□□□□ 0.81
Slc1a4O35874 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.14■□□□□ 0.81
Slc1a4O35874 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Slc1a4O35874 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc1a4O35874 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc1a4O35874 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc1a4O35874 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc1a4O35874 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc1a4O35874 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.14■□□□□ 0.81
Slc1a4O35874 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc1a4O35874 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc1a4O35874 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Slc1a4O35874 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc1a4O35874 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc1a4O35874 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc1a4O35874 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Slc1a4O35874 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc1a4O35874 Gm16061-201ENSMUST00000122167 857 ntBASIC20.13■□□□□ 0.81
Slc1a4O35874 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc1a4O35874 Gm8969-201ENSMUST00000199694 526 ntBASIC20.13■□□□□ 0.81
Slc1a4O35874 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.13■□□□□ 0.81
Slc1a4O35874 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc1a4O35874 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc1a4O35874 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc1a4O35874 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc1a4O35874 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc1a4O35874 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc1a4O35874 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc1a4O35874 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc1a4O35874 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc1a4O35874 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc1a4O35874 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc1a4O35874 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc1a4O35874 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.12■□□□□ 0.81
Slc1a4O35874 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Slc1a4O35874 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc1a4O35874 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc1a4O35874 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.12■□□□□ 0.81
Slc1a4O35874 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc1a4O35874 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc1a4O35874 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc1a4O35874 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc1a4O35874 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc1a4O35874 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc1a4O35874 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Slc1a4O35874 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc1a4O35874 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.11■□□□□ 0.81
Slc1a4O35874 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.11■□□□□ 0.81
Slc1a4O35874 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc1a4O35874 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc1a4O35874 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc1a4O35874 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc1a4O35874 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc1a4O35874 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.1■□□□□ 0.81
Slc1a4O35874 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc1a4O35874 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Slc1a4O35874 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc1a4O35874 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc1a4O35874 Gm13474-201ENSMUST00000122466 815 ntBASIC20.1■□□□□ 0.81
Slc1a4O35874 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Slc1a4O35874 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc1a4O35874 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.1■□□□□ 0.81
Slc1a4O35874 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Slc1a4O35874 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc1a4O35874 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc1a4O35874 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc1a4O35874 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc1a4O35874 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.09■□□□□ 0.81
Slc1a4O35874 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms