Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.67■□□□□ 0.58
Clk2O35491 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clk2O35491 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clk2O35491 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.67■□□□□ 0.58
Clk2O35491 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clk2O35491 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Clk2O35491 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Clk2O35491 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Clk2O35491 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clk2O35491 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clk2O35491 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clk2O35491 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clk2O35491 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clk2O35491 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clk2O35491 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clk2O35491 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clk2O35491 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clk2O35491 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.66■□□□□ 0.58
Clk2O35491 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Clk2O35491 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clk2O35491 Gm11355-201ENSMUST00000121120 306 ntBASIC18.66■□□□□ 0.58
Clk2O35491 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clk2O35491 Gm33142-201ENSMUST00000193913 867 ntBASIC18.66■□□□□ 0.58
Clk2O35491 Gm21362-201ENSMUST00000194272 928 ntBASIC18.66■□□□□ 0.58
Clk2O35491 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clk2O35491 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Clk2O35491 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clk2O35491 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clk2O35491 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Clk2O35491 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clk2O35491 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clk2O35491 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clk2O35491 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.66■□□□□ 0.58
Clk2O35491 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Clk2O35491 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clk2O35491 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clk2O35491 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clk2O35491 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clk2O35491 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clk2O35491 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clk2O35491 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.65■□□□□ 0.58
Clk2O35491 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clk2O35491 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clk2O35491 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clk2O35491 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clk2O35491 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Clk2O35491 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clk2O35491 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.65■□□□□ 0.58
Clk2O35491 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clk2O35491 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk2O35491 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk2O35491 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk2O35491 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clk2O35491 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Clk2O35491 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.64■□□□□ 0.57
Clk2O35491 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk2O35491 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk2O35491 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk2O35491 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk2O35491 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk2O35491 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clk2O35491 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk2O35491 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk2O35491 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk2O35491 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Clk2O35491 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk2O35491 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk2O35491 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clk2O35491 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Clk2O35491 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk2O35491 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk2O35491 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clk2O35491 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.63■□□□□ 0.57
Clk2O35491 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.63■□□□□ 0.57
Clk2O35491 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Clk2O35491 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Clk2O35491 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk2O35491 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk2O35491 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk2O35491 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk2O35491 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk2O35491 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk2O35491 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk2O35491 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clk2O35491 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk2O35491 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk2O35491 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clk2O35491 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clk2O35491 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clk2O35491 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.62■□□□□ 0.57
Clk2O35491 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clk2O35491 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clk2O35491 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.62■□□□□ 0.57
Clk2O35491 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Clk2O35491 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.62■□□□□ 0.57
Clk2O35491 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clk2O35491 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Clk2O35491 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.62■□□□□ 0.57
Clk2O35491 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clk2O35491 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms