Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.42□□□□□ -0.26
Tnfsf11O35235 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfsf11O35235 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Tnfsf11O35235 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.41□□□□□ -0.26
Tnfsf11O35235 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.41□□□□□ -0.26
Tnfsf11O35235 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf11O35235 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Tnfsf11O35235 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms