Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.12■□□□□ 0.17
Cx3cl1O35188 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cl1O35188 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cx3cl1O35188 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.11■□□□□ 0.17
Cx3cl1O35188 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cl1O35188 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Cx3cl1O35188 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cl1O35188 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cl1O35188 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cl1O35188 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cl1O35188 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cx3cl1O35188 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cl1O35188 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cl1O35188 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cl1O35188 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cl1O35188 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cl1O35188 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cl1O35188 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.1■□□□□ 0.17
Cx3cl1O35188 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.1■□□□□ 0.17
Cx3cl1O35188 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.1■□□□□ 0.17
Cx3cl1O35188 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cl1O35188 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.1■□□□□ 0.17
Cx3cl1O35188 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cl1O35188 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.1■□□□□ 0.17
Cx3cl1O35188 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cx3cl1O35188 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cl1O35188 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cl1O35188 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cl1O35188 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Gm30025-201ENSMUST00000218555 728 ntBASIC16.09■□□□□ 0.17
Cx3cl1O35188 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.09■□□□□ 0.17
Cx3cl1O35188 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cl1O35188 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Cx3cl1O35188 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cx3cl1O35188 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cx3cl1O35188 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cx3cl1O35188 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cx3cl1O35188 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cx3cl1O35188 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cx3cl1O35188 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cx3cl1O35188 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cx3cl1O35188 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.08■□□□□ 0.16
Cx3cl1O35188 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cx3cl1O35188 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cx3cl1O35188 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cx3cl1O35188 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cx3cl1O35188 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cx3cl1O35188 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.07■□□□□ 0.16
Cx3cl1O35188 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cx3cl1O35188 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cx3cl1O35188 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Cx3cl1O35188 Gm15565-201ENSMUST00000118890 427 ntBASIC16.07■□□□□ 0.16
Cx3cl1O35188 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms