Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.8■□□□□ 0.44
Ebf3O08791 Gm7370-201ENSMUST00000219471 767 ntBASIC17.8■□□□□ 0.44
Ebf3O08791 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ebf3O08791 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ebf3O08791 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ebf3O08791 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ebf3O08791 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ebf3O08791 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ebf3O08791 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ebf3O08791 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Ebf3O08791 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.79■□□□□ 0.44
Ebf3O08791 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ebf3O08791 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ebf3O08791 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ebf3O08791 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ebf3O08791 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ebf3O08791 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ebf3O08791 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ebf3O08791 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ebf3O08791 Ank2-226ENSMUST00000189368 339 ntBASIC17.79■□□□□ 0.44
Ebf3O08791 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.79■□□□□ 0.44
Ebf3O08791 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ebf3O08791 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ebf3O08791 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.79■□□□□ 0.44
Ebf3O08791 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.79■□□□□ 0.44
Ebf3O08791 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ebf3O08791 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ebf3O08791 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf3O08791 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf3O08791 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf3O08791 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf3O08791 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf3O08791 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ebf3O08791 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
Ebf3O08791 Gm9103-201ENSMUST00000119371 405 ntBASIC17.78■□□□□ 0.44
Ebf3O08791 Gm7284-201ENSMUST00000131667 944 ntBASIC17.78■□□□□ 0.44
Ebf3O08791 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf3O08791 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.78■□□□□ 0.44
Ebf3O08791 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.78■□□□□ 0.44
Ebf3O08791 Gm21559-201ENSMUST00000220638 855 ntBASIC17.78■□□□□ 0.44
Ebf3O08791 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf3O08791 Gm8587-201ENSMUST00000076538 843 ntBASIC17.78■□□□□ 0.44
Ebf3O08791 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf3O08791 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf3O08791 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ebf3O08791 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ebf3O08791 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ebf3O08791 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ebf3O08791 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf3O08791 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf3O08791 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf3O08791 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf3O08791 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf3O08791 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf3O08791 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf3O08791 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf3O08791 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf3O08791 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf3O08791 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf3O08791 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf3O08791 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ebf3O08791 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf3O08791 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf3O08791 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ebf3O08791 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.77■□□□□ 0.43
Ebf3O08791 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Ebf3O08791 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ebf3O08791 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ebf3O08791 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ebf3O08791 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ebf3O08791 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Ebf3O08791 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ebf3O08791 Gm17661-201ENSMUST00000170317 270 ntBASIC17.76■□□□□ 0.43
Ebf3O08791 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Gm27389-201ENSMUST00000183622 195 ntBASIC17.76■□□□□ 0.43
Ebf3O08791 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.76■□□□□ 0.43
Ebf3O08791 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ebf3O08791 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Ebf3O08791 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf3O08791 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms