Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
Dctn1O08788 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dctn1O08788 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC21.15■□□□□ 0.98
Dctn1O08788 Spr-ps1-201ENSMUST00000089584 605 ntBASIC21.15■□□□□ 0.98
Dctn1O08788 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dctn1O08788 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.15■□□□□ 0.98
Dctn1O08788 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Dctn1O08788 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Dctn1O08788 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Dctn1O08788 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Dctn1O08788 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Dctn1O08788 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Dctn1O08788 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Dctn1O08788 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21.14■□□□□ 0.97
Dctn1O08788 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21.14■□□□□ 0.97
Dctn1O08788 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Dctn1O08788 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Dctn1O08788 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Dctn1O08788 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Dctn1O08788 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Dctn1O08788 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dctn1O08788 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dctn1O08788 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dctn1O08788 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dctn1O08788 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dctn1O08788 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Dctn1O08788 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Dctn1O08788 Gm15794-201ENSMUST00000120182 631 ntBASIC21.13■□□□□ 0.97
Dctn1O08788 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC21.13■□□□□ 0.97
Dctn1O08788 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Dctn1O08788 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Dctn1O08788 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Dctn1O08788 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC21.13■□□□□ 0.97
Dctn1O08788 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dctn1O08788 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dctn1O08788 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dctn1O08788 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Dctn1O08788 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dctn1O08788 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dctn1O08788 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dctn1O08788 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Dctn1O08788 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Dctn1O08788 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dctn1O08788 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dctn1O08788 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dctn1O08788 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dctn1O08788 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dctn1O08788 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Dctn1O08788 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dctn1O08788 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Dctn1O08788 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Dctn1O08788 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dctn1O08788 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dctn1O08788 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Dctn1O08788 Gm34391-201ENSMUST00000203706 907 ntBASIC21.12■□□□□ 0.97
Dctn1O08788 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dctn1O08788 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dctn1O08788 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dctn1O08788 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Dctn1O08788 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Dctn1O08788 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Dctn1O08788 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Dctn1O08788 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Dctn1O08788 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Dctn1O08788 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Dctn1O08788 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Dctn1O08788 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Dctn1O08788 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Dctn1O08788 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.11■□□□□ 0.97
Dctn1O08788 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Dctn1O08788 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC21.11■□□□□ 0.97
Dctn1O08788 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Dctn1O08788 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Dctn1O08788 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC21.11■□□□□ 0.97
Dctn1O08788 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Dctn1O08788 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dctn1O08788 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC21.1■□□□□ 0.97
Dctn1O08788 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Dctn1O08788 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dctn1O08788 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dctn1O08788 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dctn1O08788 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC21.1■□□□□ 0.97
Dctn1O08788 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dctn1O08788 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dctn1O08788 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Dctn1O08788 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Dctn1O08788 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dctn1O08788 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dctn1O08788 AC122335.2-201ENSMUST00000213901 6181 ntBASIC21.09■□□□□ 0.97
Dctn1O08788 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dctn1O08788 Gm44771-201ENSMUST00000206975 626 ntBASIC21.09■□□□□ 0.97
Dctn1O08788 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dctn1O08788 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.09■□□□□ 0.97
Dctn1O08788 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dctn1O08788 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dctn1O08788 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Dctn1O08788 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dctn1O08788 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dctn1O08788 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Dctn1O08788 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms