Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tcof1O08784 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tcof1O08784 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Tcof1O08784 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Tcof1O08784 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tcof1O08784 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tcof1O08784 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Tcof1O08784 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tcof1O08784 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Tcof1O08784 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tcof1O08784 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tcof1O08784 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tcof1O08784 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.06■□□□□ 0.8
Tcof1O08784 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tcof1O08784 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tcof1O08784 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tcof1O08784 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.06■□□□□ 0.8
Tcof1O08784 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Tcof1O08784 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tcof1O08784 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Tcof1O08784 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tcof1O08784 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.05■□□□□ 0.8
Tcof1O08784 Gm16061-201ENSMUST00000122167 857 ntBASIC20.05■□□□□ 0.8
Tcof1O08784 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tcof1O08784 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Tcof1O08784 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tcof1O08784 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Tcof1O08784 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tcof1O08784 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tcof1O08784 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.05■□□□□ 0.8
Tcof1O08784 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tcof1O08784 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Tcof1O08784 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.05■□□□□ 0.8
Tcof1O08784 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tcof1O08784 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tcof1O08784 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tcof1O08784 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Tcof1O08784 Gm21362-201ENSMUST00000194272 928 ntBASIC20.04■□□□□ 0.8
Tcof1O08784 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tcof1O08784 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.04■□□□□ 0.8
Tcof1O08784 Gm10819-201ENSMUST00000099988 561 ntBASIC20.04■□□□□ 0.8
Tcof1O08784 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tcof1O08784 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tcof1O08784 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tcof1O08784 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.04■□□□□ 0.8
Tcof1O08784 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tcof1O08784 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.04■□□□□ 0.8
Tcof1O08784 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tcof1O08784 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tcof1O08784 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tcof1O08784 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tcof1O08784 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.04■□□□□ 0.8
Tcof1O08784 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tcof1O08784 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tcof1O08784 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tcof1O08784 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Tcof1O08784 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tcof1O08784 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tcof1O08784 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Tcof1O08784 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tcof1O08784 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tcof1O08784 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Tcof1O08784 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tcof1O08784 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Tcof1O08784 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tcof1O08784 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tcof1O08784 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tcof1O08784 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tcof1O08784 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tcof1O08784 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tcof1O08784 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Tcof1O08784 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tcof1O08784 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tcof1O08784 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Tcof1O08784 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Tcof1O08784 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tcof1O08784 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tcof1O08784 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tcof1O08784 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tcof1O08784 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.02■□□□□ 0.8
Tcof1O08784 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tcof1O08784 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tcof1O08784 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tcof1O08784 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tcof1O08784 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Tcof1O08784 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Tcof1O08784 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Tcof1O08784 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.02■□□□□ 0.79
Tcof1O08784 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tcof1O08784 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tcof1O08784 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tcof1O08784 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Tcof1O08784 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tcof1O08784 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tcof1O08784 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tcof1O08784 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tcof1O08784 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tcof1O08784 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tcof1O08784 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.01■□□□□ 0.79
Tcof1O08784 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms