Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3yl1O08641 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3yl1O08641 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3yl1O08641 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3yl1O08641 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3yl1O08641 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3yl1O08641 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3yl1O08641 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3yl1O08641 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Sh3yl1O08641 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3yl1O08641 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.34■□□□□ 0.21
Sh3yl1O08641 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Dancr-204ENSMUST00000132389 2347 ntBASIC16.34■□□□□ 0.21
Sh3yl1O08641 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Mir5122-201ENSMUST00000175004 89 ntBASIC16.34■□□□□ 0.21
Sh3yl1O08641 Gm37055-201ENSMUST00000191866 133 ntBASIC16.34■□□□□ 0.21
Sh3yl1O08641 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.34■□□□□ 0.21
Sh3yl1O08641 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3yl1O08641 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Sh3yl1O08641 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.33■□□□□ 0.21
Sh3yl1O08641 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3yl1O08641 Gm13401-201ENSMUST00000117074 291 ntBASIC16.33■□□□□ 0.2
Sh3yl1O08641 Gm11643-201ENSMUST00000119578 864 ntBASIC16.33■□□□□ 0.2
Sh3yl1O08641 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.33■□□□□ 0.2
Sh3yl1O08641 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.33■□□□□ 0.2
Sh3yl1O08641 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3yl1O08641 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3yl1O08641 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.33■□□□□ 0.2
Sh3yl1O08641 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3yl1O08641 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3yl1O08641 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Sh3yl1O08641 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3yl1O08641 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3yl1O08641 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3yl1O08641 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Sh3yl1O08641 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3yl1O08641 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.33■□□□□ 0.2
Sh3yl1O08641 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3yl1O08641 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3yl1O08641 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3yl1O08641 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3yl1O08641 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sh3yl1O08641 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3yl1O08641 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3yl1O08641 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Sh3yl1O08641 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3yl1O08641 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3yl1O08641 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.32■□□□□ 0.2
Sh3yl1O08641 Gm10517-202ENSMUST00000192970 758 ntBASIC16.32■□□□□ 0.2
Sh3yl1O08641 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3yl1O08641 Gm29791-202ENSMUST00000207888 369 ntBASIC16.32■□□□□ 0.2
Sh3yl1O08641 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3yl1O08641 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3yl1O08641 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3yl1O08641 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3yl1O08641 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3yl1O08641 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sh3yl1O08641 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3yl1O08641 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Sh3yl1O08641 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3yl1O08641 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3yl1O08641 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.31■□□□□ 0.2
Sh3yl1O08641 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3yl1O08641 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3yl1O08641 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sh3yl1O08641 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3yl1O08641 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3yl1O08641 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.31■□□□□ 0.2
Sh3yl1O08641 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3yl1O08641 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3yl1O08641 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3yl1O08641 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3yl1O08641 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3yl1O08641 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3yl1O08641 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3yl1O08641 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms