Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube4aE9Q735 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube4aE9Q735 Gm15794-201ENSMUST00000120182 631 ntBASIC20.62■□□□□ 0.89
Ube4aE9Q735 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.62■□□□□ 0.89
Ube4aE9Q735 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube4aE9Q735 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube4aE9Q735 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Ube4aE9Q735 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ube4aE9Q735 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube4aE9Q735 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube4aE9Q735 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.61■□□□□ 0.89
Ube4aE9Q735 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.61■□□□□ 0.89
Ube4aE9Q735 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube4aE9Q735 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ube4aE9Q735 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ube4aE9Q735 Phf7-203ENSMUST00000226565 1971 ntBASIC20.61■□□□□ 0.89
Ube4aE9Q735 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube4aE9Q735 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.61■□□□□ 0.89
Ube4aE9Q735 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube4aE9Q735 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube4aE9Q735 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ube4aE9Q735 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ube4aE9Q735 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube4aE9Q735 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ube4aE9Q735 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube4aE9Q735 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.61■□□□□ 0.89
Ube4aE9Q735 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.61■□□□□ 0.89
Ube4aE9Q735 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube4aE9Q735 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube4aE9Q735 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube4aE9Q735 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube4aE9Q735 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Ube4aE9Q735 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube4aE9Q735 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube4aE9Q735 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube4aE9Q735 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ube4aE9Q735 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.6■□□□□ 0.89
Ube4aE9Q735 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.6■□□□□ 0.89
Ube4aE9Q735 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.6■□□□□ 0.89
Ube4aE9Q735 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.6■□□□□ 0.89
Ube4aE9Q735 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube4aE9Q735 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube4aE9Q735 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ube4aE9Q735 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ube4aE9Q735 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube4aE9Q735 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube4aE9Q735 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube4aE9Q735 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ube4aE9Q735 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4aE9Q735 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4aE9Q735 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4aE9Q735 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4aE9Q735 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4aE9Q735 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4aE9Q735 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4aE9Q735 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4aE9Q735 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.59■□□□□ 0.89
Ube4aE9Q735 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Ube4aE9Q735 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4aE9Q735 Gm18115-201ENSMUST00000221209 621 ntBASIC20.59■□□□□ 0.89
Ube4aE9Q735 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4aE9Q735 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4aE9Q735 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4aE9Q735 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.59■□□□□ 0.89
Ube4aE9Q735 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4aE9Q735 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ube4aE9Q735 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ube4aE9Q735 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ube4aE9Q735 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ube4aE9Q735 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ube4aE9Q735 Gm8969-201ENSMUST00000199694 526 ntBASIC20.58■□□□□ 0.89
Ube4aE9Q735 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ube4aE9Q735 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.58■□□□□ 0.89
Ube4aE9Q735 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.58■□□□□ 0.89
Ube4aE9Q735 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ube4aE9Q735 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ube4aE9Q735 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ube4aE9Q735 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ube4aE9Q735 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Ube4aE9Q735 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ube4aE9Q735 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.58■□□□□ 0.88
Ube4aE9Q735 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.58■□□□□ 0.88
Ube4aE9Q735 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ube4aE9Q735 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ube4aE9Q735 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Ube4aE9Q735 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Ube4aE9Q735 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ube4aE9Q735 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Ube4aE9Q735 Gm7153-201ENSMUST00000117092 455 ntBASIC20.57■□□□□ 0.88
Ube4aE9Q735 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ube4aE9Q735 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ube4aE9Q735 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ube4aE9Q735 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ube4aE9Q735 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ube4aE9Q735 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ube4aE9Q735 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.56■□□□□ 0.88
Ube4aE9Q735 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ube4aE9Q735 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ube4aE9Q735 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ube4aE9Q735 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms