Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.88■□□□□ 0.29
Srp54bE9PXC0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54bE9PXC0 Gm18958-201ENSMUST00000174258 762 ntBASIC16.88■□□□□ 0.29
Srp54bE9PXC0 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.88■□□□□ 0.29
Srp54bE9PXC0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Srp54bE9PXC0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54bE9PXC0 Gm10566-201ENSMUST00000086739 996 ntBASIC16.88■□□□□ 0.29
Srp54bE9PXC0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54bE9PXC0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54bE9PXC0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54bE9PXC0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54bE9PXC0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54bE9PXC0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54bE9PXC0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54bE9PXC0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54bE9PXC0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54bE9PXC0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Srp54bE9PXC0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Ank2-226ENSMUST00000189368 339 ntBASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Gm29518-201ENSMUST00000190858 372 ntBASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54bE9PXC0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Gm27704-201ENSMUST00000185094 107 ntBASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54bE9PXC0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54bE9PXC0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54bE9PXC0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54bE9PXC0 Gm9103-201ENSMUST00000119371 405 ntBASIC16.85■□□□□ 0.29
Srp54bE9PXC0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54bE9PXC0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.85■□□□□ 0.29
Srp54bE9PXC0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54bE9PXC0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54bE9PXC0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Srp54bE9PXC0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Srp54bE9PXC0 Actl10-202ENSMUST00000226583 1501 ntBASIC16.85■□□□□ 0.29
Srp54bE9PXC0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54bE9PXC0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54bE9PXC0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms