Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim30cD3YVI9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim30cD3YVI9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim30cD3YVI9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim30cD3YVI9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim30cD3YVI9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim30cD3YVI9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim30cD3YVI9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim30cD3YVI9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim30cD3YVI9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim30cD3YVI9 Gm38285-201ENSMUST00000192928 922 ntBASIC18.73■□□□□ 0.59
Trim30cD3YVI9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim30cD3YVI9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim30cD3YVI9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim30cD3YVI9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim30cD3YVI9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim30cD3YVI9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim30cD3YVI9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim30cD3YVI9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim30cD3YVI9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim30cD3YVI9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim30cD3YVI9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim30cD3YVI9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.72■□□□□ 0.59
Trim30cD3YVI9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Trim30cD3YVI9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim30cD3YVI9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim30cD3YVI9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim30cD3YVI9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim30cD3YVI9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trim30cD3YVI9 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.72■□□□□ 0.59
Trim30cD3YVI9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim30cD3YVI9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim30cD3YVI9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim30cD3YVI9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim30cD3YVI9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.71■□□□□ 0.59
Trim30cD3YVI9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim30cD3YVI9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim30cD3YVI9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim30cD3YVI9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim30cD3YVI9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim30cD3YVI9 Mtag2-201ENSMUST00000058665 714 ntBASIC18.71■□□□□ 0.59
Trim30cD3YVI9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim30cD3YVI9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim30cD3YVI9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Trim30cD3YVI9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim30cD3YVI9 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.71■□□□□ 0.59
Trim30cD3YVI9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim30cD3YVI9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim30cD3YVI9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim30cD3YVI9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim30cD3YVI9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Gm10812-201ENSMUST00000099864 546 ntBASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Trim30cD3YVI9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms