Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx8D3YU81 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx8D3YU81 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.19■□□□□ 0.5
Rfx8D3YU81 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.19■□□□□ 0.5
Rfx8D3YU81 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx8D3YU81 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx8D3YU81 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx8D3YU81 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx8D3YU81 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx8D3YU81 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx8D3YU81 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx8D3YU81 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx8D3YU81 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx8D3YU81 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.18■□□□□ 0.5
Rfx8D3YU81 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx8D3YU81 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx8D3YU81 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.18■□□□□ 0.5
Rfx8D3YU81 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx8D3YU81 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.18■□□□□ 0.5
Rfx8D3YU81 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx8D3YU81 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Rfx8D3YU81 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx8D3YU81 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.18■□□□□ 0.5
Rfx8D3YU81 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.18■□□□□ 0.5
Rfx8D3YU81 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx8D3YU81 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.18■□□□□ 0.5
Rfx8D3YU81 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx8D3YU81 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx8D3YU81 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx8D3YU81 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx8D3YU81 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx8D3YU81 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx8D3YU81 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Rfx8D3YU81 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx8D3YU81 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.17■□□□□ 0.5
Rfx8D3YU81 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rfx8D3YU81 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx8D3YU81 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx8D3YU81 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx8D3YU81 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.17■□□□□ 0.5
Rfx8D3YU81 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.17■□□□□ 0.5
Rfx8D3YU81 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Rfx8D3YU81 Gm21814-202ENSMUST00000203277 873 ntBASIC18.17■□□□□ 0.5
Rfx8D3YU81 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.17■□□□□ 0.5
Rfx8D3YU81 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx8D3YU81 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx8D3YU81 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx8D3YU81 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx8D3YU81 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rfx8D3YU81 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Rfx8D3YU81 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.17■□□□□ 0.5
Rfx8D3YU81 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx8D3YU81 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx8D3YU81 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rfx8D3YU81 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx8D3YU81 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.17■□□□□ 0.5
Rfx8D3YU81 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rfx8D3YU81 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx8D3YU81 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Rfx8D3YU81 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rfx8D3YU81 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rfx8D3YU81 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx8D3YU81 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx8D3YU81 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.16■□□□□ 0.5
Rfx8D3YU81 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx8D3YU81 Gm38027-201ENSMUST00000192315 235 ntBASIC18.16■□□□□ 0.5
Rfx8D3YU81 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx8D3YU81 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx8D3YU81 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx8D3YU81 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rfx8D3YU81 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx8D3YU81 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx8D3YU81 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx8D3YU81 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx8D3YU81 Gm12085-201ENSMUST00000119263 940 ntBASIC18.15■□□□□ 0.5
Rfx8D3YU81 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.15■□□□□ 0.5
Rfx8D3YU81 Gm37025-201ENSMUST00000195159 829 ntBASIC18.15■□□□□ 0.5
Rfx8D3YU81 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.15■□□□□ 0.5
Rfx8D3YU81 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx8D3YU81 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx8D3YU81 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rfx8D3YU81 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.15■□□□□ 0.5
Rfx8D3YU81 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx8D3YU81 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx8D3YU81 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx8D3YU81 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx8D3YU81 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx8D3YU81 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.14■□□□□ 0.49
Rfx8D3YU81 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx8D3YU81 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx8D3YU81 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rfx8D3YU81 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx8D3YU81 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx8D3YU81 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rfx8D3YU81 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx8D3YU81 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Rfx8D3YU81 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx8D3YU81 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rfx8D3YU81 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx8D3YU81 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms