Protein–RNA interactions for Protein: A6H619

Phrf1, PHD and RING finger domain-containing protein 1, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phrf1A6H619 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Phrf1A6H619 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Phrf1A6H619 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phrf1A6H619 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phrf1A6H619 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phrf1A6H619 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Phrf1A6H619 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phrf1A6H619 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.21■□□□□ 0.83
Phrf1A6H619 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phrf1A6H619 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Phrf1A6H619 Mir8098-201ENSMUST00000184011 137 ntBASIC20.2■□□□□ 0.82
Phrf1A6H619 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.2■□□□□ 0.82
Phrf1A6H619 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Phrf1A6H619 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Phrf1A6H619 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phrf1A6H619 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phrf1A6H619 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phrf1A6H619 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phrf1A6H619 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phrf1A6H619 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phrf1A6H619 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Phrf1A6H619 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phrf1A6H619 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phrf1A6H619 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Phrf1A6H619 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Phrf1A6H619 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Phrf1A6H619 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phrf1A6H619 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC20.19■□□□□ 0.82
Phrf1A6H619 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Phrf1A6H619 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.19■□□□□ 0.82
Phrf1A6H619 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Phrf1A6H619 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.19■□□□□ 0.82
Phrf1A6H619 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.19■□□□□ 0.82
Phrf1A6H619 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Phrf1A6H619 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Phrf1A6H619 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phrf1A6H619 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phrf1A6H619 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phrf1A6H619 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phrf1A6H619 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phrf1A6H619 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phrf1A6H619 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.18■□□□□ 0.82
Phrf1A6H619 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phrf1A6H619 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.18■□□□□ 0.82
Phrf1A6H619 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phrf1A6H619 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Phrf1A6H619 Gm13884-201ENSMUST00000118103 829 ntBASIC20.18■□□□□ 0.82
Phrf1A6H619 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.18■□□□□ 0.82
Phrf1A6H619 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Phrf1A6H619 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Phrf1A6H619 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phrf1A6H619 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.18■□□□□ 0.82
Phrf1A6H619 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phrf1A6H619 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phrf1A6H619 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Phrf1A6H619 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Phrf1A6H619 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.17■□□□□ 0.82
Phrf1A6H619 Rprl3-201ENSMUST00000157400 290 ntBASIC20.17■□□□□ 0.82
Phrf1A6H619 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Phrf1A6H619 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phrf1A6H619 Birc2-201ENSMUST00000054878 378 ntBASIC20.17■□□□□ 0.82
Phrf1A6H619 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Phrf1A6H619 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.17■□□□□ 0.82
Phrf1A6H619 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phrf1A6H619 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phrf1A6H619 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phrf1A6H619 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phrf1A6H619 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.17■□□□□ 0.82
Phrf1A6H619 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.17■□□□□ 0.82
Phrf1A6H619 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phrf1A6H619 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Phrf1A6H619 Gm12895-201ENSMUST00000122214 226 ntBASIC20.16■□□□□ 0.82
Phrf1A6H619 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.16■□□□□ 0.82
Phrf1A6H619 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phrf1A6H619 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.16■□□□□ 0.82
Phrf1A6H619 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phrf1A6H619 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phrf1A6H619 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phrf1A6H619 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phrf1A6H619 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phrf1A6H619 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phrf1A6H619 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Phrf1A6H619 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phrf1A6H619 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phrf1A6H619 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.16■□□□□ 0.82
Phrf1A6H619 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.16■□□□□ 0.82
Phrf1A6H619 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phrf1A6H619 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phrf1A6H619 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.15■□□□□ 0.82
Phrf1A6H619 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Phrf1A6H619 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Phrf1A6H619 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Phrf1A6H619 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Phrf1A6H619 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Phrf1A6H619 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Phrf1A6H619 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Phrf1A6H619 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Phrf1A6H619 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Phrf1A6H619 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Phrf1A6H619 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms