Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Gm9885-202ENSMUST00000186234 2209 ntBASIC27.15■■□□□ 1.94
Shroom2A2ALU4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC27.15■■□□□ 1.94
Shroom2A2ALU4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Shroom2A2ALU4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Shroom2A2ALU4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Shroom2A2ALU4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
Shroom2A2ALU4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Shroom2A2ALU4 Gm6184-201ENSMUST00000120403 1261 ntBASIC27.14■■□□□ 1.94
Shroom2A2ALU4 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Shroom2A2ALU4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Shroom2A2ALU4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Shroom2A2ALU4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Shroom2A2ALU4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.93
Shroom2A2ALU4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Gm20949-201ENSMUST00000206478 952 ntBASIC27.13■■□□□ 1.93
Shroom2A2ALU4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Gm42922-201ENSMUST00000195887 2078 ntBASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 AC139382.1-201ENSMUST00000221402 498 ntBASIC27.13■■□□□ 1.93
Shroom2A2ALU4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Shroom2A2ALU4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Shroom2A2ALU4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Shroom2A2ALU4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
Shroom2A2ALU4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC27.12■■□□□ 1.93
Shroom2A2ALU4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Shroom2A2ALU4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Shroom2A2ALU4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC27.12■■□□□ 1.93
Shroom2A2ALU4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Shroom2A2ALU4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Shroom2A2ALU4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Shroom2A2ALU4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Shroom2A2ALU4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Shroom2A2ALU4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Shroom2A2ALU4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC27.11■■□□□ 1.93
Shroom2A2ALU4 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Shroom2A2ALU4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC27.11■■□□□ 1.93
Shroom2A2ALU4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Shroom2A2ALU4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC27.11■■□□□ 1.93
Shroom2A2ALU4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Shroom2A2ALU4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Shroom2A2ALU4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Shroom2A2ALU4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Shroom2A2ALU4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Shroom2A2ALU4 Gm13186-201ENSMUST00000118031 316 ntBASIC27.1■■□□□ 1.93
Shroom2A2ALU4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Shroom2A2ALU4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC27.1■■□□□ 1.93
Shroom2A2ALU4 BC021767-201ENSMUST00000126387 1716 ntBASIC27.1■■□□□ 1.93
Shroom2A2ALU4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC27.1■■□□□ 1.93
Shroom2A2ALU4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Shroom2A2ALU4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Shroom2A2ALU4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Shroom2A2ALU4 Gm11780-201ENSMUST00000136880 516 ntBASIC27.09■■□□□ 1.93
Shroom2A2ALU4 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC27.09■■□□□ 1.93
Shroom2A2ALU4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
Shroom2A2ALU4 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC27.09■■□□□ 1.93
Shroom2A2ALU4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Shroom2A2ALU4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Shroom2A2ALU4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
Shroom2A2ALU4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Shroom2A2ALU4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC27.08■■□□□ 1.93
Shroom2A2ALU4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Shroom2A2ALU4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Shroom2A2ALU4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC27.08■■□□□ 1.93
Shroom2A2ALU4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
Shroom2A2ALU4 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Shroom2A2ALU4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Shroom2A2ALU4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Shroom2A2ALU4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Shroom2A2ALU4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC27.08■■□□□ 1.93
Shroom2A2ALU4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Shroom2A2ALU4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
Shroom2A2ALU4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC27.08■■□□□ 1.92
Shroom2A2ALU4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Shroom2A2ALU4 Mir7023-201ENSMUST00000185093 64 ntBASIC27.07■■□□□ 1.92
Shroom2A2ALU4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Shroom2A2ALU4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Shroom2A2ALU4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Shroom2A2ALU4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Shroom2A2ALU4 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Shroom2A2ALU4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC27.06■■□□□ 1.92
Shroom2A2ALU4 AC124549.3-201ENSMUST00000225541 367 ntBASIC27.06■■□□□ 1.92
Shroom2A2ALU4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Shroom2A2ALU4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Shroom2A2ALU4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms