Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IsxA1A546 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IsxA1A546 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IsxA1A546 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
IsxA1A546 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IsxA1A546 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IsxA1A546 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
IsxA1A546 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
IsxA1A546 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
IsxA1A546 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IsxA1A546 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
IsxA1A546 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IsxA1A546 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IsxA1A546 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
IsxA1A546 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
IsxA1A546 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IsxA1A546 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IsxA1A546 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
IsxA1A546 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
IsxA1A546 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IsxA1A546 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
IsxA1A546 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
IsxA1A546 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IsxA1A546 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
IsxA1A546 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IsxA1A546 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
IsxA1A546 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
IsxA1A546 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.97■□□□□ 0.15
IsxA1A546 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IsxA1A546 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
IsxA1A546 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IsxA1A546 Gm22325-201ENSMUST00000158904 308 ntBASIC15.97■□□□□ 0.15
IsxA1A546 Mir8112-201ENSMUST00000184382 131 ntBASIC15.97■□□□□ 0.15
IsxA1A546 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IsxA1A546 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
IsxA1A546 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IsxA1A546 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
IsxA1A546 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IsxA1A546 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IsxA1A546 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.97■□□□□ 0.15
IsxA1A546 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
IsxA1A546 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
IsxA1A546 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
IsxA1A546 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
IsxA1A546 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IsxA1A546 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.96■□□□□ 0.15
IsxA1A546 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IsxA1A546 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
IsxA1A546 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IsxA1A546 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
IsxA1A546 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
IsxA1A546 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
IsxA1A546 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.96■□□□□ 0.15
IsxA1A546 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.96■□□□□ 0.15
IsxA1A546 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
IsxA1A546 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
IsxA1A546 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.96■□□□□ 0.15
IsxA1A546 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.96■□□□□ 0.15
IsxA1A546 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
IsxA1A546 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IsxA1A546 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.96■□□□□ 0.15
IsxA1A546 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
IsxA1A546 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
IsxA1A546 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
IsxA1A546 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.96■□□□□ 0.15
IsxA1A546 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
IsxA1A546 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
IsxA1A546 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
IsxA1A546 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.96■□□□□ 0.14
IsxA1A546 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.95■□□□□ 0.14
IsxA1A546 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
IsxA1A546 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
IsxA1A546 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.95■□□□□ 0.14
IsxA1A546 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
IsxA1A546 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
IsxA1A546 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IsxA1A546 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IsxA1A546 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
IsxA1A546 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.94■□□□□ 0.14
IsxA1A546 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms