Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Gm10493-201ENSMUST00000097270 612 ntBASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Gm44544-201ENSMUST00000207052 1844 ntBASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Gm43808-201ENSMUST00000202534 2065 ntBASIC11.36□□□□□ -0.59
Igkv1-88A0A140T8N1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv1-88A0A140T8N1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv1-88A0A140T8N1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Igkv1-88A0A140T8N1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms